RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CD1EP15812 388 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 EPB42P16452 691 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 NCALDP61601 193 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 YPEL5P62699 121 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 NAE1Q13564 534 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CLCA4Q14CN2 919 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 TCEA2Q15560 299 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ALG11Q2TAA5 492 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 SPDYAQ5MJ70 313 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 NXNQ6DKJ4 435 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 TTC23LQ6PF05 361 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 SCIMPQ6UWF3 145 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 LARP4Q71RC2 724 aaKnown RBP eCLIP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 MILR1Q7Z6M3 343 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 LRRC56Q8IYG6 542 aaPredicted RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 SNX31Q8N9S9 440 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 OR9A1PQ8NGU1 263 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 OR56A3Q8NH54 315 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 CCL4L1Q8NHW4 92 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ACTRT2Q8TDY3 377 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 SNX19Q92543 992 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 TFGQ92734 400 aaPredicted RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ATP6V1E2Q96A05 226 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 IL17FQ96PD4 163 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 OR4K3Q96R72 315 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 INSM2Q96T92 566 aaPredicted RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 GPR27Q9NS67 375 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 DNAJC11Q9NVH1 559 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 KLQ9UEF7 1012 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ACSL5Q9ULC5 683 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 PLAGL1Q9UM63 463 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 G3BP2Q9UN86 482 aaKnown RBP6.76□□□□□ -1.33
PTCD2-201ENST00000308077 DMTF1Q9Y222 760 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ASF1AQ9Y294 204 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 RNF11Q9Y3C5 154 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 ANGPTL3Q9Y5C1 460 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 HECTD1Q9ULT8 2610 aa6.76□□□□□ -1.33
PTCD2-201ENST00000308077 KCNE1BA0A087WTH5 132 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TNFRSF10CO14798 259 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 GIPC1O14908 333 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CRCPO75575 148 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 EML2O95834 649 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 SLC35G4P0C7Q5 338 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 EBLN1P0CF75 366 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 NCF2P19878 526 aaPredicted RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 KELP23276 732 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 AK4P27144 223 aaPredicted RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 ARL1P40616 181 aaPredicted RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 RABIFP47224 123 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 SCTRP47872 440 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 PIK3CGP48736 1102 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 THOP1P52888 689 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 SRP54P61011 504 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 FASTKQ14296 549 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 XKR7Q5GH72 579 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 RD3Q7Z3Z2 195 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 THOC6Q86W42 341 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 DCUN1D3Q8IWE4 304 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 DDIASQ8IXT1 998 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CAMKK1Q8N5S9 505 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 OR2T11Q8NH01 316 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 OR5K2Q8NHB8 316 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CEP70Q8NHQ1 597 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 ATL1Q8WXF7 558 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 PTCD3Q96EY7 689 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 MED8Q96G25 268 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 SLC6A18Q96N87 628 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CATSPER2Q96P56 530 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 MENTQ9BUN1 341 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TMEM168Q9H0V1 697 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 AKTIPQ9H8T0 292 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 PRDM8Q9NQV8 689 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TRPS1Q9UHF7 1281 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 STK38LQ9Y2H1 464 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 ADAMTS20P59510 1910 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 PRAMEF33A0A0G2JMD5 474 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 OR52A4PA6NMU1 304 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 METTL12A8MUP2 240 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 E7ENX8 843 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 E7EQ34 232 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 IFRD1O00458 451 aaPredicted RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TOR1BO14657 336 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 FFAR3O14843 346 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 GPR42O15529 346 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 KCNJ13O60928 360 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 UNC5CO95185 931 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 WNT1P04628 370 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 ENO1P06733 434 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 ALDOCP09972 364 aaKnown RBP6.75□□□□□ -1.33
PTCD2-201ENST00000308077 ERGP11308 486 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 HGFP14210 728 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CD22P20273 847 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 BCKDHBP21953 392 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 IDSP22304 550 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 HTR1BP28222 390 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CXCL12P48061 93 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 TBPL1P62380 186 aa6.75□□□□□ -1.33
PTCD2-201ENST00000308077 CTBSQ01459 385 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms