RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CD53P19397 219 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ARL2P36404 184 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ACTR1BP42025 376 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 TPTEP56180 551 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 IFI35P80217 286 aaPredicted RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 PFKFB4Q16877 469 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 THOC6Q86W42 341 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 IZUMO1Q8IYV9 350 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 ELMO3Q96BJ8 720 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 CMTM7Q96FZ5 175 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 EXOSC4Q9NPD3 245 aaKnown RBP3.94□□□□□ -1.78
USH2A-201ENST00000307340 ENTPD2Q9Y5L3 495 aa3.94□□□□□ -1.78
USH2A-201ENST00000307340 SLC22A31A6NKX4 558 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 C9IYK1 514 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 STMND1H3BQB6 276 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GJA8P48165 433 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GJA9P57773 515 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GPX6P59796 221 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RHEBQ15382 184 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GPR150Q8NGU9 434 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TAMM41Q96BW9 452 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CMTM3Q96MX0 182 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 LGR4Q9BXB1 951 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PLEKHA1Q9HB21 404 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZDHHC7Q9NXF8 308 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FBXO9Q9UK97 447 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 RNF150Q9ULK6 438 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 USP27XA6NNY8 438 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 WASHC1A8K0Z3 465 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 WASH3PC4AMC7 463 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 M0R129 80 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RDH16O75452 317 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 LCN1P31025 176 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 NDUFV1P49821 464 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CBWD6Q4V339 395 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FAM69AQ5T7M9 428 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 OR2T5Q6IEZ7 315 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 KLHL24Q6TFL4 600 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 WASH2PQ6VEQ5 465 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 KIF18BQ86Y91 864 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GATAD2AQ86YP4 633 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 OR2T29Q8NH02 315 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CD180Q99467 661 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GORASP2Q9H8Y8 452 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TUBAL3A6NHL2 446 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 C2CD4BA6NLJ0 364 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ATE1O95260 518 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 HSD17B1P14061 328 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ADRA1BP35368 520 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PRKCZQ05513 592 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SWI5Q1ZZU3 235 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 DNAJC22Q8N4W6 341 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 IL17RCQ8NAC3 791 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 OR6C4Q8NGE1 309 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ADAMTS16Q8TE57 1224 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TNFAIP8L1Q8WVP5 186 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ITPAQ9BY32 194 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 EPHX3Q9H6B9 360 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TM9SF3Q9HD45 589 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ARHGEF4Q9NR80 690 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PCDHB11Q9Y5F2 797 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MMP20O60882 483 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 HTR2AP28223 471 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SCARF1Q14162 830 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SH3PXD2AQ5TCZ1 1133 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ABHD12BQ7Z5M8 362 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 ACOT1Q86TX2 421 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 OR52E4Q8NGH9 312 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SEMA4DQ92854 862 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CELF4Q9BZC1 486 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 MED28Q9H204 178 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MEAF6Q9HAF1 191 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TMEM138Q9NPI0 162 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 C2orf71A6NGG8 1288 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 H7C1Q1 480 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZBTB39O15060 712 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FBLN1P23142 703 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GADD45AP24522 165 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CBX3Q13185 183 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GLRA4Q5JXX5 417 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZNF367Q7RTV3 350 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 DRAXINQ8NBI3 349 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZNF558Q96NG5 402 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SERINC1Q9NRX5 453 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TAS2R9Q9NYW1 312 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SYNJ2BP-COX16A0A087WUM0 186 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TRAPPC2P0DI81 140 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TRAPPC2BP0DI82 140 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 YBX3P16989 372 aaKnown RBP eCLIP3.93□□□□□ -1.78
USH2A-201ENST00000307340 RPL4P36578 427 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZNF621Q6ZSS3 439 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 DCUN1D3Q8IWE4 304 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CARFQ8N187 725 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CHPT1Q8WUD6 406 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SLC28A3Q9HAS3 691 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SLC35C2Q9NQQ7 365 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 COX16Q9P0S2 106 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 EDARQ9UNE0 448 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MAB21L2Q9Y586 359 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms