RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MAGEB17A8MXT2 336 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 LATS1O95835 1130 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 DLGAP3O95886 979 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 CDH1P12830 882 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 GALK1P51570 392 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 KPNB1Q14974 876 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 C1orf189Q5VU69 101 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TNFAIP8L2Q6P589 184 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 CCDC103Q8IW40 242 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 DEPDC4Q8N2C3 294 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 FSTL5Q8N475 847 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TRAM1L1Q8N609 369 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 LRRC57Q8N9N7 239 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TCEAL4Q96EI5 215 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TMLHEQ9NVH6 421 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 VPS29Q9UBQ0 182 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 SLCO3A1Q9UIG8 710 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ECI2O75521 394 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 STX11O75558 287 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 FHP07954 510 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ARMC4Q5T2S8 1044 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 LRRC70Q7Z2Q7 622 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 BPIFB6Q8NFQ5 453 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 GLYATL1Q969I3 302 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TDRD1Q9BXT4 1180 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF180Q9UJW8 692 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 KCTD3Q9Y597 815 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TJP1Q07157 1748 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 CCR10P46092 362 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 NUMA1Q14980 2115 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 DDI2Q5TDH0 399 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TCEAL8Q8IYN2 117 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 XYLT2Q9H1B5 865 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 SALL4Q9UJQ4 1053 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ELOA3DA6NLF2 546 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 C9JVG2 144 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 M0QZQ0 153 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 HADHBP55084 474 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ERVFC1P60507 584 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 RAB8AP61006 207 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ELOA3BQ3SY89 546 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 AP1ARQ63HQ0 302 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ELOA3Q8NG57 546 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 SCAMP4Q969E2 229 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TOE1Q96GM8 510 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 FCRL4Q96PJ5 515 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 C6orf62Q9GZU0 229 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 NLE1Q9NVX2 485 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 OAS1P00973 400 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PRPS2P11908 318 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ADRB3P13945 408 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 SNTA1Q13424 505 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 SPIN4Q56A73 249 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PDSS1Q5T2R2 415 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ERICH5Q6P6B1 374 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 TERB1Q8NA31 727 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 GRHL3Q8TE85 626 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF483Q8TF39 744 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 RASSF5Q8WWW0 418 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 KAT2AQ92830 837 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 GFM1Q96RP9 751 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PEBP4Q96S96 227 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 CPEB1Q9BZB8 566 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 FBRSL1Q9HCM7 1045 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 DNAAF2Q9NVR5 837 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 NUMBLQ9Y6R0 609 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 MBLAC1A4D2B0 266 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 K7ERQ8 282 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PGM3O95394 542 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 NUDT17P0C025 328 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PFKLP17858 780 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 CSNK2A2P19784 350 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ITGA3P26006 1051 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 GRIA1P42261 906 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM214AQ32MH5 1076 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 TRMT10BQ6PF06 316 aaKnown RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ATCAYQ86WG3 371 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 C12orf40Q86WS4 652 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF761Q86XN6 746 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 THAP3Q8WTV1 239 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 HOPXQ9BPY8 73 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 EFCAB11Q9BUY7 163 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 HIDE1A8MVS5 230 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 MFN2O95140 757 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM58BPP0C7Q3 252 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 RAB28P51157 221 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF41P51814 821 aaPredicted RBP10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 HHEXQ03014 270 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 GFOD2Q3B7J2 385 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 TRIQKQ629K1 86 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 ZCCHC12Q6PEW1 402 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 PLEKHO2Q8TD55 490 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 IGKV6-21A0A0C4DH24 114 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 A0A1W2PRB8 838 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 TCRBV7S3A2A0A539 114 aa10.44□□□□□ -0.74
SYNPO2-201ENST00000307142 MAGEA13PA6NCF6 341 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms