RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 EIF3LQ9Y262 564 aaKnown RBP10.66□□□□□ -0.7
LSM3-201ENST00000306024 FAM92AA1XBS5 289 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 I3L521 148 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 JUNBP17275 347 aaPredicted RBP10.66□□□□□ -0.7
LSM3-201ENST00000306024 LBPP18428 481 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 BNC1Q01954 994 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 KCNAB2Q13303 367 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 SUZ12Q15022 739 aaKnown RBP10.66□□□□□ -0.7
LSM3-201ENST00000306024 CDK10Q15131 360 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 LILRA6Q6PI73 481 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 CNSTQ6PJW8 725 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 AMIGO1Q86WK6 493 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 FAM109AQ8N4B1 249 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 OR8H1Q8NGG4 311 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 ENKURQ8TC29 256 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 NDFIP2Q9NV92 336 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 TMEM248Q9NWD8 314 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 GMPPBQ9Y5P6 360 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 MAGED1Q9Y5V3 778 aaPredicted RBP10.66□□□□□ -0.7
LSM3-201ENST00000306024 A0A0D9SEW6 157 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 BTN3A3O00478 584 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 NPHS1O60500 1241 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 ZDHHC11BP0C7U3 371 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 MAPK12P53778 367 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 CD47Q08722 323 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 AHSA2Q719I0 299 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 FAM83FQ8NEG4 500 aaPredicted RBP10.66□□□□□ -0.7
LSM3-201ENST00000306024 ASIC4Q96FT7 647 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 TEKT5Q96M29 485 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 TMEM74Q96NL1 305 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 TBCDQ9BTW9 1192 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 GIMAP2Q9UG22 337 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 TBC1D3BA6NDS4 549 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 B8ZZF3 427 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 RGS13O14921 159 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 KATNA1O75449 491 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 MT-CYBP00156 380 aaPredicted RBP10.65□□□□□ -0.7
LSM3-201ENST00000306024 ADH1CP00326 375 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 KLKB1P03952 638 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 RBP1P09455 135 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 UBL4AP11441 157 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 UQCRC1P31930 480 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 VIPR2P41587 438 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 SLC10A7Q0GE19 358 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 CDH17Q12864 832 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 TAZQ16635 292 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 PLEKHM3Q6ZWE6 761 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 CENPLQ8N0S6 344 aaPredicted RBP10.65□□□□□ -0.7
LSM3-201ENST00000306024 UBE2J2Q8N2K1 259 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 CELF5Q8N6W0 485 aaKnown RBP10.65□□□□□ -0.7
LSM3-201ENST00000306024 OR6K2Q8NGY2 324 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 CNIH3Q8TBE1 160 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 GANCQ8TET4 914 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 SNAPC3Q92966 411 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 VMP1Q96GC9 406 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 CCDC120Q96HB5 630 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 UHRF1Q96T88 793 aaPredicted RBP10.65□□□□□ -0.7
LSM3-201ENST00000306024 DHRS9Q9BPW9 319 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 MMP27Q9H306 513 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 ZNF224Q9NZL3 707 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 ERVK-18Q9QC07 812 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 GON4LQ3T8J9 2241 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 ERI2A8K979 691 aaKnown RBP10.65□□□□□ -0.7
LSM3-201ENST00000306024 ANXA6P08133 673 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 CEBPBP17676 345 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 MSH3P20585 1137 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 CSKP41240 450 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 IL10RBQ08334 325 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 LY6G5CQ5SRR4 150 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 C16orf62Q7Z3J2 963 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 TRIM48Q8IWZ4 208 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 ZNF557Q8N988 423 aaPredicted RBP10.65□□□□□ -0.7
LSM3-201ENST00000306024 MRPL38Q96DV4 380 aaKnown RBP10.65□□□□□ -0.7
LSM3-201ENST00000306024 PPM1MQ96MI6 270 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 SLA2Q9H6Q3 261 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 ABCB8Q9NUT2 735 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 MAU2Q9Y6X3 613 aa10.65□□□□□ -0.7
LSM3-201ENST00000306024 EFCAB10A6NFE3 127 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 SLC1A7O00341 560 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 ALDH1A2O94788 518 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 C1QAP02745 245 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 SLC6A4P31645 630 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 OR3A3P47888 321 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 WNT3AP56704 352 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 CYP4F2P78329 520 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 DSC2Q02487 901 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 CHRNEQ04844 493 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 CYP4F3Q08477 520 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 LAPTM5Q13571 262 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 ADPRMQ3LIE5 342 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 PXDC1Q5TGL8 231 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 STEAP4Q687X5 459 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 LCN8Q6JVE9 175 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 CYS1Q717R9 158 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 SPRED1Q7Z699 444 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 SLC22A9Q8IVM8 553 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 ADHFE1Q8IWW8 467 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 ATG16L2Q8NAA4 619 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 LPCAT1Q8NF37 534 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms