RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 H3BM21 787 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 C1orf105O95561 183 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 B3GALT4O96024 378 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 LAMP2P13473 410 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 JUPP14923 745 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 UQCRBP14927 111 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 NCK1P16333 377 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 MAP4P27816 1152 aaKnown RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 OXTRP30559 389 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 GDI1P31150 447 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SOX11P35716 441 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 GRIA2P42262 883 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 HALP42357 657 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 BNIP2Q12982 314 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 MAD2L1Q13257 205 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 PWP1Q13610 501 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 DOC2AQ14183 400 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SPATS1Q496A3 300 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 AGBL4Q5VU57 503 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 FAM83HQ6ZRV2 1179 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 IFNEQ86WN2 208 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 TRAPPC5Q8IUR0 188 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 MSRB3Q8IXL7 192 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 ADCY4Q8NFM4 1077 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 WDR20Q8TBZ3 569 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SLC13A3Q8WWT9 602 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PPP2R3CQ969Q6 453 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 ELSPBP1Q96BH3 223 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 EGLN2Q96KS0 407 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 VCX3BQ9H321 246 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 IKZF5Q9H5V7 419 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 DYRK4Q9NR20 520 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 BATF3Q9NR55 127 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SLC6A13Q9NSD5 602 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 CCM2LQ9NUG4 571 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 SLC25A37Q9NYZ2 338 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 VAPAQ9P0L0 249 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PRKAB1Q9Y478 270 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 AK5Q9Y6K8 562 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 DNAH14Q0VDD8 3507 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 TCRBV5S2A0A599 114 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 PABPN1LA6NDY0 278 aaKnown RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 IGLON5A6NGN9 336 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 IFRD1O00458 451 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 LIN7AO14910 233 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 MID1O15344 667 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 DFNA5O60443 496 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 CATP04040 527 aaKnown RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 PGRP06401 933 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 ZNF26P17031 533 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 HRH2P25021 359 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 EIF2DP41214 584 aaKnown RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 EEFSECP57772 596 aaKnown RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 OR4D2P58180 307 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 MTPNP58546 118 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 PCDH1Q08174 1060 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 NFE2L1Q14494 772 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 XKR6Q5GH73 641 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 CACHD1Q5VU97 1274 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 DSG4Q86SJ6 1040 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 YAF2Q8IY57 180 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 SPDYE1Q8NFV5 336 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 ZNF480Q8WV37 535 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 MED8Q96G25 268 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 COX14Q96I36 57 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 LINC00615Q96LM1 132 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 CGREF1Q99674 301 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 KCTD14Q9BQ13 255 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 DPY30Q9C005 99 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 RSPH9Q9H1X1 276 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 ARMC1Q9NVT9 282 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 MSRAQ9UJ68 235 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 PPT2Q9UMR5 302 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 SH2B3Q9UQQ2 575 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 A6NHS1 94 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 AQP12BA6NM10 295 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 C1QTNF3-AMACRE9PGA6 284 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 K7EQS6 105 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 UGDHO60701 494 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 TIPRLO75663 272 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 POP7O75817 140 aaKnown RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 UBTFL6P0CB48 400 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 AMD1P17707 334 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 SDC1P18827 310 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 ACADLP28330 430 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 CLDN8P56748 225 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 IRF8Q02556 426 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 FOLH1Q04609 750 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 LIPJQ5W064 366 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 CRTC3Q6UUV7 619 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 AMIGO2Q86SJ2 522 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 AQP12AQ8IXF9 295 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 RIMKLAQ8IXN7 391 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 ADGRG5Q8IZF4 528 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 CXorf40AQ8TE69 158 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 NEIL2Q969S2 332 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 RAB7BQ96AH8 199 aa6.35□□□□□ -1.39
USP47-201ENST00000305481 C11orf24Q96F05 449 aaPredicted RBP6.35□□□□□ -1.39
USP47-201ENST00000305481 CMTM7Q96FZ5 175 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms