RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SUSD1Q6UWL2 747 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 APLFQ8IW19 511 aaPredicted RBP18.87■□□□□ 0.61
HOXC4-201ENST00000303406 AADATQ8N5Z0 425 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 OR2L2Q8NH16 312 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 WDR20Q8TBZ3 569 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 CSGALNACT1Q8TDX6 532 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 HIC2Q96JB3 615 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 INTS7Q9NVH2 962 aaKnown RBP18.87■□□□□ 0.61
HOXC4-201ENST00000303406 ATXN10Q9UBB4 475 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 RAB26Q9ULW5 256 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 DNMT3AQ9Y6K1 912 aaPredicted RBP18.87■□□□□ 0.61
HOXC4-201ENST00000303406 STON1Q9Y6Q2 735 aa18.87■□□□□ 0.61
HOXC4-201ENST00000303406 DOCK8Q8NF50 2099 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 PDE4DIPQ5VU43 2346 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 K7ESM1 405 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 HNRNPRO43390 633 aaKnown RBP18.86■□□□□ 0.61
HOXC4-201ENST00000303406 PRMT3O60678 531 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 PIM1P11309 404 aaPredicted RBP18.86■□□□□ 0.61
HOXC4-201ENST00000303406 LAMP2P13473 410 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 GRIA3P42263 894 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 TNFRSF4P43489 277 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 BDKRB1P46663 353 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 CLCN2P51788 898 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 RPA4Q13156 261 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 CAMK2GQ13555 558 aaPredicted RBP18.86■□□□□ 0.61
HOXC4-201ENST00000303406 NAE1Q13564 534 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 LRRC36Q1X8D7 754 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 RABL3Q5HYI8 236 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 XKR5Q6UX68 686 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 UNC5DQ6UXZ4 953 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 CYP2R1Q6VVX0 501 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 TRAPPC5Q8IUR0 188 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 LILRA3Q8N6C8 439 aaPredicted RBP18.86■□□□□ 0.61
HOXC4-201ENST00000303406 GTF2H4Q92759 462 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 TESCQ96BS2 214 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 SH3GL1Q99961 368 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 Q9H521 79 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 BRF2Q9HAW0 419 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 ITM2CQ9NQX7 267 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 MAN2B2Q9Y2E5 1009 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 PCDHB3Q9Y5E6 796 aa18.86■□□□□ 0.61
HOXC4-201ENST00000303406 DHRS12A0PJE2 317 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 MGAT4DA6NG13 374 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 PLK4O00444 970 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 LINC01565O15544 149 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 RNASEH1O60930 286 aaKnown RBP18.85■□□□□ 0.61
HOXC4-201ENST00000303406 PGRP06401 933 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 AMD1P17707 334 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 PDHA2P29803 388 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 HABP4Q5JVS0 413 aaKnown RBP18.85■□□□□ 0.61
HOXC4-201ENST00000303406 CES5AQ6NT32 575 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 ERMP1Q7Z2K6 904 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 CFAP206Q8IYR0 622 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 WDR34Q96EX3 536 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 HHIPQ96QV1 700 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 SPATA6Q9NWH7 488 aaPredicted RBP18.85■□□□□ 0.61
HOXC4-201ENST00000303406 SLAMF8Q9P0V8 285 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 GMPR2Q9P2T1 348 aaKnown RBP18.85■□□□□ 0.61
HOXC4-201ENST00000303406 MAGEL2Q9UJ55 1249 aa18.85■□□□□ 0.61
HOXC4-201ENST00000303406 KLHL33A6NCF5 533 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 ZNF839A8K0R7 811 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 DENRO43583 198 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 POP7O75817 140 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 BMP2P12643 396 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 ZNF8P17098 575 aaPredicted RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 C5AR1P21730 350 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 IL10P22301 178 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 PSMA4P25789 261 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 PBLDP30039 288 aaPredicted RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 GDI1P31150 447 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 DRD3P35462 400 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 DGKQP52824 942 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 C21orf58P58505 322 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 ADAM15Q13444 863 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 MED21Q13503 144 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 DOC2AQ14183 400 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 CST6Q15828 149 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 MAPKAPK3Q16644 382 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 FAM174BQ3ZCQ3 159 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 XKR6Q5GH73 641 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 MTX3Q5HYI7 312 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 CAPN13Q6MZZ7 669 aaPredicted RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 ZNF547Q8IVP9 402 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 ANKFN1Q8N957 763 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 PAPD5Q8NDF8 572 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 MTFMTQ96DP5 389 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 TRMT61BQ9BVS5 477 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 OSBPL6Q9BZF3 934 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 S1PR5Q9H228 398 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 MAPRE3Q9UPY8 281 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 NEUROG3Q9Y4Z2 214 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 KCNE2Q9Y6J6 123 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 CKAP5Q14008 2032 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 TCRBV5S2A0A599 114 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 GPR89AB7ZAQ6 455 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 ERN1O75460 977 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 SLC16A8O95907 504 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 GPR89BP0CG08 455 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 FCGR1AP12314 374 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 CD22P20273 847 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms