RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 HTRA2O43464 458 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CD2P06729 351 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 DBIP07108 87 aaKnown RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SSTR1P30872 391 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CHRNB4P30926 498 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SHMT1P34896 483 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CHKAP35790 457 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PFKPQ01813 784 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 RELAQ04206 551 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 E2F2Q14209 437 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 IFI44LQ53G44 452 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 WDR88Q6ZMY6 472 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ASPGQ86U10 573 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SLC47A2Q86VL8 602 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CMTR2Q8IYT2 770 aaKnown RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF548Q8NEK5 533 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ELMO3Q96BJ8 720 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PARK7Q99497 189 aaKnown RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF471Q9BX82 626 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 FBXO9Q9UK97 447 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PCDHB11Q9Y5F2 797 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 NDUFB9Q9Y6M9 179 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 DGKBQ9Y6T7 804 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ATP6AP2A0A1C7CYW4 349 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 HMX3A6NHT5 357 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 EFCAB9A8MZ26 197 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PLOD3O60568 738 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ATP6AP2O75787 350 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 UGT2B17O75795 530 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 RPP40O75818 363 aaKnown RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ADAP00813 363 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 BMP7P18075 431 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PVALBP20472 110 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 MASP1P48740 699 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PUM1Q14671 1186 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 TPRG1LQ5T0D9 272 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 GPR139Q6DWJ6 353 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 MRPS31Q92665 395 aaKnown RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF566Q969W8 418 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 C12orf42Q96LP6 360 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 UHRF1Q96T88 793 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PHOX2BQ99453 314 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 COPS4Q9BT78 406 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CCDC106Q9BWC9 280 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 MAGEH1Q9H213 219 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 DCSTAMPQ9H295 470 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 MIOSQ9NXC5 875 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ABCG2Q9UNQ0 655 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PCDHGA11Q9Y5H2 935 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CAMTA1Q9Y6Y1 1673 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 LCHNA4D1U4 455 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 HSPB2A8KAH6 182 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 AIPO00170 330 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 RGS13O14921 159 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 KCNJ13O60928 360 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 AFF1P51825 1210 aaKnown RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 MLLT6P55198 1093 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 RHEBQ15382 184 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SEC23BQ15437 767 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 HSPB2Q16082 182 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 MGAT5BQ3V5L5 792 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 C10orf120Q5SQS8 335 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 LRRC66Q68CR7 880 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ELP2Q6IA86 826 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SYVN1Q86TM6 617 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PSD4Q8NDX1 1056 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PIGKQ92643 395 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SPATA33Q96N06 139 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CCNL2Q96S94 520 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 MGME1Q9BQP7 344 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 DERL2Q9GZP9 239 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 LMAN2LQ9H0V9 348 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 EBF3Q9H4W6 596 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 TLR8Q9NR97 1041 aaKnown RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 HEBP1Q9NRV9 189 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 WASF3Q9UPY6 502 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CLDN11O75508 207 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 IGSF6O95976 241 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PLGP00747 810 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SHBGP04278 402 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 LPOP22079 712 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SERPINA4P29622 427 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 LIPEQ05469 1076 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 LRRN4CLQ8ND94 238 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 DYNLL2Q96FJ2 89 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ART5Q96L15 291 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ORAI2Q96SN7 254 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 SYT15Q9BQS2 421 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CBWD1Q9BRT8 395 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 POLMQ9NP87 494 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 POLR3BQ9NW08 1133 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-201ENST00000303395 DDIT4Q9NX09 232 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 ASIC5Q9NY37 505 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 DNMT3LQ9UJW3 386 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 PCDHA2Q9Y5H9 948 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 OR1I1O60431 355 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 FGBP02675 491 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 TACSTD2P09758 323 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 HGFP14210 728 aa5.14□□□□□ -1.59
SCN1A-201ENST00000303395 CASRP41180 1078 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms