RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TUBA3CQ13748 450 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 C1orf94Q6P1W5 598 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 KCNK18Q7Z418 384 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TOP6BLQ8N6T0 577 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 MIPEPQ99797 713 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 FBXL3Q9UKT7 428 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PLLPQ9Y342 182 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 DUXAA6NLW8 204 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SLC31A1O15431 190 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ADRB2P07550 413 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ANXA3P12429 323 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 GNRHRP30968 328 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 MAT2AP31153 395 aaKnown RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 XKP51811 444 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM214Q6NUQ4 689 aaKnown RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ARL9Q6T311 187 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SLC30A8Q8IWU4 369 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PRELID2Q8N945 189 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 C12orf29Q8N999 325 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ATAD1Q8NBU5 361 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 RBM15BQ8NDT2 890 aaKnown RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 MFSD8Q8NHS3 518 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SPPL2BQ8TCT7 592 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SEC14L1Q92503 715 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 NMUR2Q9GZQ4 415 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 KCNQ5Q9NR82 932 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 VNN3Q9NY84 501 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SH2B3Q9UQQ2 575 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 AGLP35573 1532 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 A8MUA0 341 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 MEN1O00255 615 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 EIF1AYO14602 144 aaKnown RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PCDHGA12O60330 932 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 OR4F21O95013 312 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 FESP07332 822 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 RPS2P15880 293 aaKnown RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF14P17017 642 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 BRCC3P46736 316 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 LIMK2P53671 638 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PER3P56645 1201 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 CREB5Q02930 508 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ENPP2Q13822 863 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SLC25A52Q3SY17 297 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TEX44Q53QW1 395 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM220Q6QAJ8 160 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SNX29P2Q8IUI4 249 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 RASGRP3Q8IV61 690 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 LRRN4CLQ8ND94 238 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 OR7D4Q8NG98 312 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PFDN5Q99471 154 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TBCCD1Q9NVR7 557 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 KCNN3Q9UGI6 736 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 DIP2BQ9P265 1576 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 A0A0G2JMP0 313 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 FAM234BA2RU67 622 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TVP23AA6NH52 213 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF670-ZNF695F2Z2N8 137 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ENPP3O14638 875 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 LGR5O75473 907 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 YES1P07947 543 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 GSTT2P0CG29 244 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 MPIP34949 423 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TNFSF9P41273 254 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 BLKP51451 505 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 FXYD6P3P58550 94 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 CXCL9Q07325 125 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PRAMEF19Q5SWL8 479 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ZYG11AQ6WRX3 759 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF280BQ86YH2 543 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TIGD4Q8IY51 512 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 OR4M2Q8NGB6 313 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 OR4K17Q8NGC6 315 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 CASTOR1Q8WTX7 329 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 COPS5Q92905 334 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 EPYCQ99645 322 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 HIPK3Q9H422 1215 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 KCND1Q9NSA2 647 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 JCADQ9P266 1359 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 A0A1B0GVM2 712 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TCAF2A6NFQ2 919 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ADM5C9JUS6 153 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 TRAPPC6AO75865 159 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 GNSP15586 552 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 FMO3P31513 532 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PRKCIP41743 596 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 E2F1Q01094 437 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 VITQ6UXI7 678 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 LINGO4Q6UY18 593 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 LDB1Q86U70 411 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SLC22A17Q8WUG5 538 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 C17orf50Q8WW18 174 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 HBEGFQ99075 208 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 ACO2Q99798 780 aaKnown RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SSX3Q99909 188 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 POLMQ9NP87 494 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 RUVBL1Q9Y265 456 aaKnown RBP10.18□□□□□ -0.78
CLIP1-201ENST00000302528 PCDHGA11Q9Y5H2 935 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 NCANO14594 1321 aa10.18□□□□□ -0.78
CLIP1-201ENST00000302528 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms