RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 IFNA21P01568 189 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 FPR1P21462 350 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 HOXC12P31275 282 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CAPZA1P52907 286 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MAPK14Q16539 360 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 GPR153Q6NV75 609 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 NUDT13Q86X67 352 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 IQCF2Q8IXL9 164 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 C12orf43Q96C57 262 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 DMRTB1Q96MA1 342 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SLC35A5Q9BS91 424 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 POPDC3Q9HBV1 291 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 FAM105AQ9NUU6 356 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TNFRSF10DQ9UBN6 386 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 UBQLN2Q9UHD9 624 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CPA4Q9UI42 421 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CNOT11Q9UKZ1 510 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 LRRC37A3O60309 1634 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TCRBV7S2A1N4TA0A589 114 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 BUD23O43709 281 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 INMTO95050 263 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PGLSO95336 258 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 NCK1P16333 377 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 FOXN2P32314 431 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TSPAN5P62079 268 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 FKBP1BP68106 108 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 NFKB2Q00653 900 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SF1Q15637 639 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM80Q96HE8 168 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 XKR8Q9H6D3 395 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MKKSQ9NPJ1 570 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 FAM120CQ9NX05 1096 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SNX10Q9Y5X0 201 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TOPAZ1Q8N9V7 1692 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 NOBOXO60393 691 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 KDM4BO94953 1096 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MPIP34949 423 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ASPAP45381 313 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TCEAL1Q15170 157 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ATP6AP1Q15904 470 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PLEKHN1Q494U1 663 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 RPL13AP3Q6NVV1 102 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 GID4Q8IVV7 300 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 OR2AJ1Q8NGZ0 328 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MOAP1Q96BY2 351 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 COPZ2Q9P299 210 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TLR6Q9Y2C9 796 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MAFBQ9Y5Q3 323 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MAGED1Q9Y5V3 778 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 RCBTB2O95199 551 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 VARSP26640 1264 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MAGEA12P43365 314 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 NAE1Q13564 534 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MEDAGQ5VYS4 303 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MBOAT1Q6ZNC8 495 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 NAT8LQ8N9F0 302 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 DRAXINQ8NBI3 349 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 STOML3Q8TAV4 291 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PLEKHO2Q8TD55 490 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 KCTD13Q8WZ19 329 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CGREF1Q99674 301 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TNKS2Q9H2K2 1166 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CHMP1AQ9HD42 196 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MED31Q9Y3C7 131 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 A0A1W2PP18 115 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 H1F0P07305 194 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 VGLL4Q14135 290 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PTGR1Q14914 329 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SLC36A4Q6YBV0 504 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TMBIM1Q969X1 311 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 FCRL5Q96RD9 977 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CORO1BQ9BR76 489 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 NUDT15Q9NV35 164 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 C5orf51A6NDU8 294 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 IRAK2O43187 625 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF823P16415 610 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TAL1P17542 331 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ITGB5P18084 799 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CORO1AP31146 461 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ICAM3P32942 547 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MAP3K8P41279 467 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 DUSP28Q4G0W2 176 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 RNASE12Q5GAN4 147 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SERPINA9Q86WD7 417 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ANKFN1Q8N957 763 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 RGMAQ96B86 450 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PIWIL1Q96J94 861 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 C5orf34Q96MH7 638 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TAPBPLQ9BX59 468 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 BTBD1Q9H0C5 482 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 RETREG1Q9H6L5 497 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 BRD7Q9NPI1 651 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 FAM198AQ9UFP1 575 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM5Q9Y2B1 443 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 KCNIP3Q9Y2W7 256 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 EXOSC1Q9Y3B2 195 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MRPS23Q9Y3D9 190 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 SPIN1Q9Y657 262 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CLDN5O00501 218 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms