RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 ITGA8P53708 1063 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 CDKN2DP55273 166 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 RPS18P62269 152 aaKnown RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 COL9A2Q14055 689 aaPredicted RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 KRT33BQ14525 404 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 PPP1R7Q15435 360 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 DEFB110Q30KQ9 67 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 SPANXN3Q5MJ09 141 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 FAM69BQ5VUD6 431 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 ZNF425Q6IV72 752 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 RHBDD2Q6NTF9 364 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 CASC4Q6P4E1 433 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 CYB5D1Q6P9G0 228 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 RNF44Q7L0R7 432 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 PCGF5Q86SE9 256 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 SDCCAG8Q86SQ7 713 aaPredicted RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 KLHL7Q8IXQ5 586 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 OR2L3Q8NG85 312 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 SEC14L1Q92503 715 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 RAD51AP1Q96B01 352 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 LRRC39Q96DD0 335 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 CERS2Q96G23 380 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 GPR21Q99679 349 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 TSSK1BQ9BXA7 367 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 SPRTNQ9H040 489 aaPredicted RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 CHST8Q9H2A9 424 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 ACTL8Q9H568 366 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 SLC6A20Q9NP91 592 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 SMYD2Q9NRG4 433 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 C20orf96Q9NUD7 363 aaPredicted RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 GEMIN8Q9NWZ8 242 aaKnown RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 SPATA7Q9P0W8 599 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 ASIC3Q9UHC3 531 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 TUBD1Q9UJT1 453 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 IKZF3Q9UKT9 509 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 TDRKHQ9Y2W6 561 aaKnown RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 PSAT1Q9Y617 370 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 TMEM150CB9EJG8 249 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 E7ENX8 843 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 F8W8V4 182 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 K7EM74 188 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 SMAPO00193 183 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 ZNF749O43361 778 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 RAD51CO43502 376 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 CREG1O75629 220 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 FKBP9O95302 570 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 TTC4O95801 387 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 SLC16A8O95907 504 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 RAB40ALP0C0E4 278 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 MPC1LP0DKB6 136 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 PTPN4P29074 926 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 CCNFP41002 786 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 ITGA1P56199 1179 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 MRPS25P82663 173 aaKnown RBP10.82□□□□□ -0.68
CLCC1-201ENST00000302500 TAP2Q03519 686 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 CUL1Q13616 776 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 TMED2Q15363 201 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 TRADDQ15628 312 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 UGT8Q16880 541 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 MRPL14Q6P1L8 145 aaKnown RBP10.82□□□□□ -0.68
CLCC1-201ENST00000302500 ZNF449Q6P9G9 518 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 TMEM207Q6UWW9 146 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 ZDHHC24Q6UX98 284 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 KIAA0408Q6ZU52 694 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 COX15Q7KZN9 410 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 APLFQ8IW19 511 aaPredicted RBP10.82□□□□□ -0.68
CLCC1-201ENST00000302500 C2orf73Q8N5S3 287 aaPredicted RBP10.82□□□□□ -0.68
CLCC1-201ENST00000302500 ZNF480Q8WV37 535 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 RUNDC3BQ96NL0 473 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 CATSPER2Q96P56 530 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 PKP4Q99569 1192 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 OLFM1Q99784 485 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 FAM167BQ9BTA0 163 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 NAT9Q9BTE0 207 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 EFHD1Q9BUP0 239 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 GPR87Q9BY21 358 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 MLXIPLQ9NP71 852 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 IARS2Q9NSE4 1012 aaKnown RBP10.82□□□□□ -0.68
CLCC1-201ENST00000302500 SOHLH2Q9NX45 425 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 SAMD15Q9P1V8 674 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 ADAMTS6Q9UKP5 1117 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 MAD1L1Q9Y6D9 718 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 COMMD10Q9Y6G5 202 aa10.82□□□□□ -0.68
CLCC1-201ENST00000302500 TARM1B6A8C7 271 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 RPN2P04844 631 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 CBSLP0DN79 551 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 TCN2P20062 427 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 FDXRP22570 491 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 IMPA1P29218 277 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 CBSP35520 551 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 PPM1FP49593 454 aaPredicted RBP10.81□□□□□ -0.68
CLCC1-201ENST00000302500 CSRP3P50461 194 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 POLE2P56282 527 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 ARHGAP19Q14CB8 494 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 TMTC4Q5T4D3 741 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 FRMPD2BQ6IN97 320 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 ARMC6Q6NXE6 501 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 FBXO42Q6P3S6 717 aa10.81□□□□□ -0.68
CLCC1-201ENST00000302500 BORAQ6PGQ7 559 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms