RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 NLE1Q9NVX2 485 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-201ENST00000302278 ANO10Q9NW15 660 aa6.17□□□□□ -1.42
ITGB1-201ENST00000302278 FKBPLQ9UIM3 349 aa6.17□□□□□ -1.42
ITGB1-201ENST00000302278 ASB1Q9Y576 335 aa6.17□□□□□ -1.42
ITGB1-201ENST00000302278 ARL5AQ9Y689 179 aa6.17□□□□□ -1.42
ITGB1-201ENST00000302278 SPTBP11277 2137 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 CACNA1CQ13936 2221 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 A0A087X0T9 212 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 STX7O15400 261 aaKnown RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ALOX12BO75342 701 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 FAM228BP0C875 321 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 HADHBP55084 474 aaKnown RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 FOXL2P58012 376 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 DSG2Q14126 1118 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 DEFB110Q30KQ9 67 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 DET1Q7L5Y6 550 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 DMRTC2Q8IXT2 367 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 EID3Q8N140 333 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 DCUN1D1Q96GG9 259 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 C10orf90Q96M02 699 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ZNF160Q9HCG1 818 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ZNF282Q9UDV7 671 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 RIMKLBQ9ULI2 386 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 RASGRF2O14827 1237 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 PRPF4O43172 522 aaKnown RBP eCLIP6.16□□□□□ -1.421e-9■■□□□ 12.7
ITGB1-201ENST00000302278 CRTAMO95727 393 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 WDPCPO95876 746 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 HOXD4P09016 255 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 TMEM253P0C7T8 217 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 DNAJA1P31689 397 aaKnown RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 GEMP55040 296 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 CSNK1G2P78368 415 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 KRT33BQ14525 404 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 NPNTQ6UXI9 565 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 CHDHQ8NE62 594 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 OR4K2Q8NGD2 314 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 STT3BQ8TCJ2 826 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 CHTF18Q8WVB6 975 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 TUBB6Q9BUF5 446 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 RAB11FIP5Q9BXF6 653 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ZNF304Q9HCX3 659 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 NSG1A0A0A6YYJ2 146 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ANXA9O76027 345 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 H2AFZP0C0S5 128 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ITGALP20701 1170 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 NSG1P42857 185 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 SLC1A1P43005 524 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 GARNL3Q5VVW2 1013 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 KCTD11Q693B1 232 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 ZNF449Q6P9G9 518 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 TTLL10Q6ZVT0 673 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 H2AFVQ71UI9 128 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 PHC3Q8NDX5 983 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 CCDC110Q8TBZ0 833 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 BLOC1S5Q8TDH9 187 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 MAGEB10Q96LZ2 347 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 TRIM51Q9BSJ1 452 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 CEP41Q9BYV8 373 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 XKR8Q9H6D3 395 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 SOX17Q9H6I2 414 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 NPDC1Q9NQX5 325 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-201ENST00000302278 CAPN11Q9UMQ6 739 aa6.16□□□□□ -1.42
ITGB1-201ENST00000302278 PRRC2AP48634 2157 aaKnown RBP6.15□□□□□ -1.42
ITGB1-201ENST00000302278 OR2A25A4D2G3 310 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 MROH6A6NGR9 719 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 GPC4O75487 556 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 FTH1P02794 183 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 POLBP06746 335 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 SKILP12757 684 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 PTPN7P35236 360 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 EFNA3P52797 238 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 PLAG1Q6DJT9 500 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 LINC00696Q6ZRV3 163 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 MMP21Q8N119 569 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 AMER3Q8N944 861 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-201ENST00000302278 HGH1Q9BTY7 390 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 CRB3Q9BUF7 120 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 MKKSQ9NPJ1 570 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-201ENST00000302278 FAM169AQ9Y6X4 670 aa6.15□□□□□ -1.42
ITGB1-201ENST00000302278 SLC4A1P02730 911 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 ITGAMP11215 1152 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 GRIA3P42263 894 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 ZBED6P86452 979 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 ACVR1Q04771 509 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 TUBA3CQ13748 450 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 GSE1Q14687 1217 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 ALKBH5Q6P6C2 394 aaKnown RBP6.15□□□□□ -1.43
ITGB1-201ENST00000302278 TUBA3EQ6PEY2 450 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 M1APQ8TC57 530 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 N4BP2L2Q92802 583 aaPredicted RBP6.15□□□□□ -1.43
ITGB1-201ENST00000302278 MIEF2Q96C03 454 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 CRLS1Q9UJA2 301 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 ITGB1BP2Q9UKP3 347 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 HEY1Q9Y5J3 304 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 SCN2AQ99250 2005 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 ARHGAP21Q5T5U3 1957 aa6.15□□□□□ -1.43
ITGB1-201ENST00000302278 HYKKA2RU49 373 aa6.14□□□□□ -1.43
ITGB1-201ENST00000302278 PSTPIP1O43586 416 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms