RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KBTBD8Q8NFY9 601 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 CLHC1Q8NHS4 586 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 JPH3Q8WXH2 748 aaPredicted RBP10.62□□□□□ -0.71
ZNF558-201ENST00000301475 PSMG2Q969U7 264 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 MYLPFQ96A32 169 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 TADA1Q96BN2 335 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 SMARCD1Q96GM5 515 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 PHOX2BQ99453 314 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 PITX2Q99697 317 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 CPPED1Q9BRF8 314 aaPredicted RBP10.62□□□□□ -0.71
ZNF558-201ENST00000301475 KRT84Q9NSB2 600 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 LYVE1Q9Y5Y7 322 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 PER2O15055 1255 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 NIPSNAP2O75323 286 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 IL1RNP18510 177 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 VLDLRP98155 873 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 TP53BP2Q13625 1128 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 UBXN11Q5T124 520 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 GPSM1Q86YR5 675 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 EEF1AKMT1Q8WVE0 214 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 FCGR1BQ92637 280 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 FAM120BQ96EK7 910 aaKnown RBP10.62□□□□□ -0.71
ZNF558-201ENST00000301475 FYTTD1Q96QD9 318 aaKnown RBP10.62□□□□□ -0.71
ZNF558-201ENST00000301475 TRIM39Q9HCM9 518 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 CPA4Q9UI42 421 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 TSR3Q9UJK0 312 aaKnown RBP10.62□□□□□ -0.71
ZNF558-201ENST00000301475 BTBD3Q9Y2F9 522 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 PCDHGA6Q9Y5G7 932 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 PPP2R3BQ9Y5P8 575 aa10.62□□□□□ -0.71
ZNF558-201ENST00000301475 KRT87PA6NCN2 255 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ZSCAN5BA6NJL1 495 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 PTHP01270 115 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 VIPP01282 170 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 CYP2A7P20853 494 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 PIK3CBP42338 1070 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 HMGCS1Q01581 520 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 SUSD1Q6UWL2 747 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 GOLGA7Q7Z5G4 137 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 VTCN1Q7Z7D3 282 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 PEX5LQ8IYB4 626 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ATG16L2Q8NAA4 619 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 TNKS2Q9H2K2 1166 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 RUBCNLQ9H714 662 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 KIF17Q9P2E2 1029 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 LOC110117498-PIK3R3F6TDL0 507 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 CYP7B1O75881 506 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ADORA3P0DMS8 318 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 FPR1P21462 350 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 NUDT6P53370 316 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 NPRL3Q12980 569 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 CAMK2GQ13555 558 aaPredicted RBP10.61□□□□□ -0.71
ZNF558-201ENST00000301475 PTPRNQ16849 979 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ZMAT1Q5H9K5 638 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 PIK3R6Q5UE93 754 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ATG9BQ674R7 924 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 OR8H2Q8N162 312 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 LIX1Q8N485 282 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 TP53I13Q8NBR0 393 aaPredicted RBP10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ANKK1Q8NFD2 765 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ZNF675Q8TD23 568 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 TBC1D20Q96BZ9 403 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 LINGO1Q96FE5 620 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 CDKN2AIPNLQ96HQ2 116 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 ZBTB18Q99592 522 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 KCNS3Q9BQ31 491 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 DPY30Q9C005 99 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 SLA2Q9H6Q3 261 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 RANGRFQ9HD47 186 aaPredicted RBP10.61□□□□□ -0.71
ZNF558-201ENST00000301475 IL1RAPQ9NPH3 570 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 FARSBQ9NSD9 589 aaKnown RBP10.61□□□□□ -0.71
ZNF558-201ENST00000301475 PSORS1C1Q9UIG5 152 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 GRIP1Q9Y3R0 1128 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 SNX8Q9Y5X2 465 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 PTCH2Q9Y6C5 1203 aa10.61□□□□□ -0.71
ZNF558-201ENST00000301475 MEIS3P2A8K0S8 358 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 E9PQ18 207 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 TFECO14948 347 aaPredicted RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 OR1I1O60431 355 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 DNAJA1P31689 397 aaKnown RBP10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ELP6Q0PNE2 266 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 DDR2Q16832 855 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 PARP15Q460N3 678 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 GPR153Q6NV75 609 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 MILR1Q7Z6M3 343 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ANKRD46Q86W74 232 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 C3orf58Q8NDZ4 430 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 TTC16Q8NEE8 873 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 PPTC7Q8NI37 304 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 OR52E6Q96RD3 313 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 INPP5KQ9BT40 448 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 CCDC32Q9BV29 185 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 CLMPQ9H6B4 373 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 CSNK1G1Q9HCP0 422 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 SERHLQ9NQF3 203 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 TAS2R16Q9NYV7 291 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 ZMYM5Q9UJ78 669 aa10.6□□□□□ -0.71
ZNF558-201ENST00000301475 SAMHD1Q9Y3Z3 626 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms