RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 A0A1W2PQ67 120 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 WASH3PC4AMC7 463 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 SH3BGRLO75368 114 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 MYF6P23409 242 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 NNMTP40261 264 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 OR4D2P58180 307 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 NEK5Q6P3R8 708 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 SUSD1Q6UWL2 747 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 C7orf61Q8IZ16 206 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 TNIP2Q8NFZ5 429 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 ZNF707Q96C28 371 aaPredicted RBP21.36■■□□□ 1.01
TPM4-201ENST00000300933 NEURL2Q9BR09 285 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 OAZ3Q9UMX2 235 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 ANKRD28O15084 1053 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 SGTAO43765 313 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 PRAMEF4O60810 478 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 CYP17A1P05093 508 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 CTSCP53634 463 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 NR1D2Q14995 579 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 PLCL1Q15111 1095 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 CYP51A1Q16850 503 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 FAM174BQ3ZCQ3 159 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 CCSMST1Q4G0I0 132 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 PRAMEF9Q5VWM5 478 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 ZC3H7AQ8IWR0 971 aaKnown RBP21.36■■□□□ 1.01
TPM4-201ENST00000300933 SEPHS2Q99611 448 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 TMEM106CQ9BVX2 250 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 HEBP1Q9NRV9 189 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 ZIM2Q9NZV7 527 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 TBC1D14Q9P2M4 693 aa21.36■■□□□ 1.01
TPM4-201ENST00000300933 IGLV3-16A0A075B6K0 115 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 DHRS12A0PJE2 317 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 C16orf96A6NNT2 1141 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 ZNF701M0R085 212 aaPredicted RBP21.35■■□□□ 1.01
TPM4-201ENST00000300933 MANBAO00462 879 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 CLOCKO15516 846 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 PDYNP01213 254 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 ZNF12P17014 697 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 DGKGP49619 791 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 ANKRD26P1Q6NSI1 321 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 SLC15A4Q8N697 577 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 ASB11Q8WXH4 323 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 IL36AQ9UHA7 158 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 ZNF106Q9H2Y7 1883 aaKnown RBP21.35■■□□□ 1.01
TPM4-201ENST00000300933 PRRT4C9JH25 899 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 XYLBO75191 536 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 VIPR1P32241 457 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 BRAT1Q6PJG6 821 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 DLEU7Q6UYE1 221 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 PARVBQ9HBI1 364 aa21.35■■□□□ 1.01
TPM4-201ENST00000300933 TRIM64CA6NLI5 447 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 HSD17B1P14061 328 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 LBX1P52954 281 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 ITGADQ13349 1161 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 ACOX1Q15067 660 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 SPANXN4Q5MJ08 99 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 EGFLAMQ63HQ2 1017 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 ACPTQ9BZG2 426 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 RGS14O43566 566 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 TSPAN6O43657 245 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 DFNA5O60443 496 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 TULP3O75386 442 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 INHBBP09529 407 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 HIST1H2AGP0C0S8 130 aaPredicted RBP21.34■■□□□ 1.01
TPM4-201ENST00000300933 MSH3P20585 1137 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 HIST1H2ADP20671 130 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 DDX6P26196 483 aaKnown RBP eCLIP21.34■■□□□ 1.011e-6■□□□□ 10.8
TPM4-201ENST00000300933 DCKP27707 260 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 SF1Q15637 639 aaKnown RBP21.34■■□□□ 1.01
TPM4-201ENST00000300933 CYP2A13Q16696 494 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 PRMT9Q6P2P2 845 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 CACUL1Q86Y37 369 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 SP7Q8TDD2 431 aaPredicted RBP21.34■■□□□ 1.01
TPM4-201ENST00000300933 HIST1H2AHQ96KK5 128 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 HIST1H2AJQ99878 128 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 H2AFJQ9BTM1 129 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 TRIM54Q9BYV2 358 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 SLC32A1Q9H598 525 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 VAPAQ9P0L0 249 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 DLGAP4Q9Y2H0 992 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 ATG2BQ96BY7 2078 aa21.34■■□□□ 1.01
TPM4-201ENST00000300933 LRATO95237 230 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 CLDN9O95484 217 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 CDH3P22223 829 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 MAP4P27816 1152 aaKnown RBP21.33■■□□□ 1.01
TPM4-201ENST00000300933 SLC36A3Q495N2 470 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 ADAMTS16Q8TE57 1224 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 LRTM1Q9HBL6 345 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 PRM3Q9NNZ6 103 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 TMEM247A6NEH6 219 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 EI24O14681 340 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 ADH5P11766 374 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 HOXD12P35452 270 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 GNPDA1P46926 289 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 GTDC1Q4AE62 458 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 PARS2Q7L3T8 475 aaKnown RBP21.33■■□□□ 1.01
TPM4-201ENST00000300933 SELENOMQ8WWX9 145 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 DUS3LQ96G46 650 aaKnown RBP21.33■■□□□ 1.01
TPM4-201ENST00000300933 NTMT1Q9BV86 223 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 RDH14Q9HBH5 336 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms