RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 PER2O15055 1255 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 NUAK1O60285 661 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 ZNF821O75541 412 aaPredicted RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 EPN2O95208 641 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 TMED1Q13445 227 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 NAE1Q13564 534 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 PON2Q15165 354 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 PLEKHS1Q5SXH7 462 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 BRAT1Q6PJG6 821 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 ZNF557Q8N988 423 aaPredicted RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 VPS37AQ8NEZ2 397 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 MYLIPQ8WY64 445 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 CLP1Q92989 425 aaKnown RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 TOX2Q96NM4 488 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 MTERF1Q99551 399 aaKnown RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 CPEB1Q9BZB8 566 aaKnown RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 PCDH12Q9NPG4 1184 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 SLC25A37Q9NYZ2 338 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 ZFC3H1O60293 1989 aaKnown RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 ZNF197O14709 1029 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 ARHGEF15O94989 841 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 C1SP09871 688 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 CTSAP10619 480 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 TYRP14679 529 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 TACR1P25103 407 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 TMEM26Q6ZUK4 368 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 RAVER1Q8IY67 606 aaKnown RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 ALDH16A1Q8IZ83 802 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 PNPT1Q8TCS8 783 aaKnown RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 ATL1Q8WXF7 558 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 APIPQ96GX9 242 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 MAGEB10Q96LZ2 347 aaPredicted RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 P2RY13Q9BPV8 354 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 RIOK2Q9BVS4 552 aaKnown RBP13.25□□□□□ -0.29
CDH8-201ENST00000299345 CFHR5Q9BXR6 569 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 TMED5Q9Y3A6 229 aa13.25□□□□□ -0.29
CDH8-201ENST00000299345 KRT87PA6NCN2 255 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 MPC1LP0DKB6 136 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 PRKACGP22612 351 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 B4GALNT1Q00973 533 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ABHD18Q0P651 414 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 KIAA0040Q15053 153 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ACOX1Q15067 660 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ARSIQ5FYB1 569 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 NOXRED1Q6NXP6 359 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 VRK3Q8IV63 474 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 SLC22A15Q8IZD6 547 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 B4GALNT2Q8NHY0 566 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 TIFAQ96CG3 184 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 EGLN2Q96KS0 407 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 INPP5KQ9BT40 448 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 CEP44Q9C0F1 390 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 HCFC1R1Q9NWW0 138 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 BPTFQ12830 3046 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 PTGES3LE9PB15 166 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ALPLP05186 524 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 CLTBP09497 229 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 SDC1P18827 310 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 PRPS1L1P21108 318 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 HLCSP50747 726 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ST8SIA6P61647 398 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ADARB1P78563 741 aaKnown RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 SP140Q13342 867 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 PMS2P3Q13401 168 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ELMSAN1Q6PJG2 1045 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 HS3ST5Q8IZT8 346 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 CYB5D2Q8WUJ1 264 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 IRF7Q92985 503 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 KAT8Q9H7Z6 458 aaKnown RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 NTN4Q9HB63 628 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 OGDHLQ9ULD0 1010 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ANKRD36A6QL64 1941 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 KPNA3O00505 521 aaPredicted RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 FPGTO14772 594 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ZNF30P17039 623 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 VIPR1P32241 457 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ETV3P41162 512 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 IL5RAQ01344 420 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 RAB39AQ14964 217 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 LY6G5CQ5SRR4 150 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ZNF648Q5T619 568 aaPredicted RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 CES5AQ6NT32 575 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 NEK5Q6P3R8 708 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 HORMAD1Q86X24 394 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ARL10Q8N8L6 244 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 OR5K1Q8NHB7 308 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 POP5Q969H6 163 aaKnown RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 ECHDC3Q96DC8 303 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 MCCC1Q96RQ3 725 aaPredicted RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 NPLQ9BXD5 320 aaPredicted RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 FANCEQ9HB96 536 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 TDP1Q9NUW8 608 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 ASIC5Q9NY37 505 aa13.24□□□□□ -0.29
CDH8-201ENST00000299345 SAMD4AQ9UPU9 718 aaKnown RBP13.24□□□□□ -0.29
CDH8-201ENST00000299345 CHD5Q8TDI0 1954 aa13.23□□□□□ -0.29
CDH8-201ENST00000299345 GNG14A0A1W2PPG7 69 aa13.23□□□□□ -0.29
CDH8-201ENST00000299345 MGAT4DA6NG13 374 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms