RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TTPALQ9BTX7 342 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 NMUR1Q9HB89 426 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 TMLHEQ9NVH6 421 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 THUMPD1Q9NXG2 353 aaKnown RBP11.14□□□□□ -0.63
TRUB1-201ENST00000298746 GPR83Q9NYM4 423 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 FBXO10Q9UK96 956 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 METTL15A6NJ78 407 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 ZSCAN5BA6NJL1 495 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 E2F3O00716 465 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 AP3D1O14617 1153 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 GPR32O75388 356 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 RHOQP17081 205 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 IL12RB1P42701 662 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 TTPAP49638 278 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 HK3P52790 923 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 SMARCB1Q12824 385 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 CDC20Q12834 499 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 NPRL3Q12980 569 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 CAMK2GQ13555 558 aaPredicted RBP11.14□□□□□ -0.63
TRUB1-201ENST00000298746 SMU1Q2TAY7 513 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 PIANPQ8IYJ0 282 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 CADM2Q8N3J6 435 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 CAMKK1Q8N5S9 505 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 C3orf58Q8NDZ4 430 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 ST13P5Q8NFI4 369 aaPredicted RBP11.14□□□□□ -0.63
TRUB1-201ENST00000298746 OR7G1Q8NGA0 311 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 ZNF675Q8TD23 568 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 OMA1Q96E52 524 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 INPP5KQ9BT40 448 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 CNPPD1Q9BV87 410 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 CLPBQ9H078 707 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 ZNF556Q9HAH1 456 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
TRUB1-201ENST00000298746 FAM25AB3EWG3 89 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 FAM25CB3EWG5 89 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 FAM25GB3EWG6 89 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 CBX4O00257 560 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 FFAR2O15552 330 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ATXN1LP0C7T5 689 aaKnown RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 FPR1P21462 350 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ZFP36L2P47974 494 aaKnown RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 INPP1P49441 399 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 GNG2P59768 71 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SLC39A12Q504Y0 691 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 RAB41Q5JT25 222 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SHQ1Q6PI26 577 aaKnown RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 LINC00299Q6ZSB3 139 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 TSPYL5Q86VY4 417 aaPredicted RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 TRIB2Q92519 343 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 DNASE1L2Q92874 299 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 RHBDF1Q96CC6 855 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 APOLD1Q96LR9 279 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 CENPOQ9BU64 300 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ACTL8Q9H568 366 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 TOR4AQ9NXH8 423 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SLC25A37Q9NYZ2 338 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 A8MX80 341 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 HOXC11O43248 304 aaPredicted RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ITGB1P05556 798 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SMPD1P17405 629 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 POLR2EP19388 210 aaKnown RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 LPOP22079 712 aaPredicted RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 PBX3P40426 434 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 CCDC58Q4VC31 144 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 PRSS36Q5K4E3 855 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ZNF648Q5T619 568 aaPredicted RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 OR4F3Q6IEY1 312 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 FBXL22Q6P050 247 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ADAMTSL2Q86TH1 951 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 OR7D4Q8NG98 312 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 DPH2Q9BQC3 489 aaPredicted RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SLC30A2Q9BRI3 323 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 HEBP1Q9NRV9 189 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 OSGIN1Q9UJX0 560 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 RPS6KA6Q9UK32 745 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 MKLN1Q9UL63 735 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SPO11Q9Y5K1 396 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 LYVE1Q9Y5Y7 322 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 NINQ8N4C6 2090 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 CCDC182A6NF36 153 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 CENPBD1B2RD01 187 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 KIAA0513O60268 411 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 PCDHGA12O60330 932 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 KRT6AP02538 564 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 KRT6BP04259 564 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 PRR35P0CG20 571 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 CA5AP35218 305 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 PTPRRQ15256 657 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 TSTQ16762 297 aaKnown RBP11.13□□□□□ -0.63
TRUB1-201ENST00000298746 TAPT1Q6NXT6 567 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 TUBA3EQ6PEY2 450 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 GPR149Q86SP6 731 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 GALNT13Q8IUC8 556 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 RGL4Q8IZJ4 473 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 PGBD5Q8N414 524 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ISG20Q96AZ6 181 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms