RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 RAI2Q9Y5P3 530 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 ILVBLA1L0T0 632 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 MITFO75030 526 aaPredicted RBP18.7■□□□□ 0.58
TRA2A-201ENST00000297071 RFPL2O75678 378 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 KRT6AP02538 564 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 KRT6BP04259 564 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 ITGB1P05556 798 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 ZDHHC11BP0C7U3 371 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 BCKDHAP12694 445 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 MAPK1P28482 360 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 HOXA9P31269 272 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 RGRP47804 291 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 KRT6CP48668 564 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 TPTEP56180 551 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 BEX3Q00994 111 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 GGTA1PQ4G0N0 100 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 FBXO43Q4G163 708 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 CATSPEREQ5SY80 951 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 LYPLAL1Q5VWZ2 237 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 DSG4Q86SJ6 1040 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 RGL4Q8IZJ4 473 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 AMER2Q8N7J2 671 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 HASPINQ8TF76 798 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 SPATA17Q96L03 361 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 CDK5RAP1Q96SZ6 601 aaKnown RBP18.7■□□□□ 0.58
TRA2A-201ENST00000297071 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.7■□□□□ 0.583e-9■■□□□ 13.6
TRA2A-201ENST00000297071 SACM1LQ9NTJ5 587 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 ELOVL2Q9NXB9 296 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 IL17CQ9P0M4 197 aa18.7■□□□□ 0.58
TRA2A-201ENST00000297071 EVLQ9UI08 416 aaPredicted RBP18.7■□□□□ 0.58
TRA2A-201ENST00000297071 AGO1Q9UL18 857 aaKnown RBP18.7■□□□□ 0.58
TRA2A-201ENST00000297071 ZNF490Q9ULM2 529 aaPredicted RBP18.7■□□□□ 0.58
TRA2A-201ENST00000297071 ZNF7P17097 686 aaPredicted RBP18.69■□□□□ 0.58
TRA2A-201ENST00000297071 HSPA7P48741 367 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 ITGA1P56199 1179 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 ELP6Q0PNE2 266 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 C10orf120Q5SQS8 335 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 ATAD3BQ5T9A4 648 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 ZNF598Q86UK7 904 aaKnown RBP18.69■□□□□ 0.58
TRA2A-201ENST00000297071 BEND7Q8N7W2 519 aaPredicted RBP18.69■□□□□ 0.58
TRA2A-201ENST00000297071 LPCAT1Q8NF37 534 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 HRASLS5Q96KN8 279 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 RAD9AQ99638 391 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 ZBED2Q9BTP6 218 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 YIPF2Q9BWQ6 316 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 LATS2Q9NRM7 1088 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 EXD2Q9NVH0 621 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 FKBP14Q9NWM8 211 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 KLHL42Q9P2K6 505 aa18.69■□□□□ 0.58
TRA2A-201ENST00000297071 H3BNC9 293 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 DYRK3O43781 588 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 ACSL4O60488 711 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 PRMT3O60678 531 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 FABP3P05413 133 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 OR4Q2P0C623 313 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 FSHRP23945 695 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 PLIN5Q00G26 463 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 CACNB2Q08289 660 aaPredicted RBP18.68■□□□□ 0.58
TRA2A-201ENST00000297071 DDR2Q16832 855 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 GTDC1Q4AE62 458 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 CBLL1Q75N03 491 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 CEP68Q76N32 757 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 EIF3MQ7L2H7 374 aaKnown RBP18.68■□□□□ 0.58
TRA2A-201ENST00000297071 PHACTR4Q8IZ21 702 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 KBTBD8Q8NFY9 601 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 NUDT8Q8WV74 236 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 EPYCQ99645 322 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 NSUN3Q9H649 340 aaKnown RBP18.68■□□□□ 0.58
TRA2A-201ENST00000297071 PADI3Q9ULW8 664 aa18.68■□□□□ 0.58
TRA2A-201ENST00000297071 EVPLLA8MZ36 301 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 FAM47E-STBD1D6RA91 191 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 SYN3O14994 580 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 CLDN11O75508 207 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 WBP4O75554 376 aaKnown RBP18.67■□□□□ 0.58
TRA2A-201ENST00000297071 FADS2O95864 444 aaKnown RBP18.67■□□□□ 0.58
TRA2A-201ENST00000297071 IGHA2P01877 340 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 KRT20P35900 424 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 LIMK1P53667 647 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 HTRA3P83110 453 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 MTAPQ13126 283 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 BOP1Q14137 746 aaKnown RBP18.67■□□□□ 0.58
TRA2A-201ENST00000297071 SIM2Q14190 667 aaPredicted RBP18.67■□□□□ 0.58
TRA2A-201ENST00000297071 C18orf21Q32NC0 220 aaPredicted RBP18.67■□□□□ 0.58
TRA2A-201ENST00000297071 CHST9Q7L1S5 443 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 MYDGFQ969H8 173 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 MYEOVQ96EZ4 313 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 KRT84Q9NSB2 600 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 SPATA7Q9P0W8 599 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 KLQ9UEF7 1012 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 ZMYM5Q9UJ78 669 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 A0A0D9SEW6 157 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 SNPHO15079 494 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 ASNA1O43681 348 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 EPB42P16452 691 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 GPX2P18283 190 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 CTSKP43235 329 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 LSM3P62310 102 aaKnown RBP18.67■□□□□ 0.58
TRA2A-201ENST00000297071 ZNF33BQ06732 778 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 NPRL3Q12980 569 aa18.67■□□□□ 0.58
TRA2A-201ENST00000297071 VEZF1Q14119 521 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms