RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MIER2Q8N344 545 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 OR9A1PQ8NGU1 263 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 RCN3Q96D15 328 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 GUCD1Q96NT3 240 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 TIMM29Q9BSF4 260 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 BTBD1Q9H0C5 482 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
LSM6-201ENST00000296581 FFAR3O14843 346 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 LSM1O15116 133 aaKnown RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 GPR42O15529 346 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 TPD52L2O43399 206 aaKnown RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 UGDHO60701 494 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 ULK1O75385 1050 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 IGLV3-19P01714 112 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 IL9P15248 144 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 FUNDC1Q8IVP5 155 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 SYNPOQ8N3V7 929 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 ZNF480Q8WV37 535 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 SCARF2Q96GP6 870 aaPredicted RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 UHRF1Q96T88 793 aaPredicted RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 THTPAQ9BU02 230 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 BRINP2Q9C0B6 783 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 SGK2Q9HBY8 427 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 POLMQ9NP87 494 aaPredicted RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 CCDC167Q9P0B6 97 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 EBF1Q9UH73 591 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 ZNHIT2Q9UHR6 403 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 SCOCQ9UIL1 159 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 LRRC72A6NJI9 287 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 CACNB4O00305 520 aaPredicted RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 SLC28A1O00337 649 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 AIM2O14862 343 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 KRT6AP02538 564 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 KRT6BP04259 564 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 ZNF24P17028 368 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 GSTT1P30711 240 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 KRT6CP48668 564 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 DGKEP52429 567 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 DIO3P55073 304 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 KIAA1024LP59773 190 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 PRKCQQ04759 706 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 STX5Q13190 355 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 KIF19Q2TAC6 998 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 SMU1Q2TAY7 513 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 PUS10Q3MIT2 529 aaKnown RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 PAOXQ6QHF9 649 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 KYQ8NBH2 561 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 OR9I1Q8NGQ6 314 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 HMGB4Q8WW32 186 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 PPP3R2Q96LZ3 170 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 OR4K3Q96R72 315 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 HBEGFQ99075 208 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 EFCAB1Q9HAE3 211 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 ACSL5Q9ULC5 683 aa15.09■□□□□ 0.01
LSM6-201ENST00000296581 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.09■□□□□ 0.01
LSM6-201ENST00000296581 A0A088AWK7 358 aa15.08■□□□□ 0
LSM6-201ENST00000296581 PRR19A6NJB7 356 aa15.08■□□□□ 0
LSM6-201ENST00000296581 RGS14O43566 566 aa15.08■□□□□ 0
LSM6-201ENST00000296581 KCNJ13O60928 360 aa15.08■□□□□ 0
LSM6-201ENST00000296581 SNRPB2P08579 225 aaKnown RBP15.08■□□□□ 0
LSM6-201ENST00000296581 NUDT2P50583 147 aa15.08■□□□□ 0
LSM6-201ENST00000296581 EMX2Q04743 252 aa15.08■□□□□ 0
LSM6-201ENST00000296581 CPSF6Q16630 551 aaKnown RBP eCLIP15.08■□□□□ 0
LSM6-201ENST00000296581 WASHC2DQ5SRD0 308 aa15.08■□□□□ 0
LSM6-201ENST00000296581 LIPJQ5W064 366 aa15.08■□□□□ 0
LSM6-201ENST00000296581 SYT13Q7L8C5 426 aa15.08■□□□□ 0
LSM6-201ENST00000296581 SCUBE1Q8IWY4 988 aa15.08■□□□□ 0
LSM6-201ENST00000296581 ULK2Q8IYT8 1036 aa15.08■□□□□ 0
LSM6-201ENST00000296581 DNAJC9Q8WXX5 260 aa15.08■□□□□ 0
LSM6-201ENST00000296581 SLC25A23Q9BV35 468 aa15.08■□□□□ 0
LSM6-201ENST00000296581 VCX3BQ9H321 246 aa15.08■□□□□ 0
LSM6-201ENST00000296581 VCX3AQ9NNX9 186 aa15.08■□□□□ 0
LSM6-201ENST00000296581 FARSBQ9NSD9 589 aaKnown RBP15.08■□□□□ 0
LSM6-201ENST00000296581 TMEM45AQ9NWC5 275 aa15.08■□□□□ 0
LSM6-201ENST00000296581 CIDEBQ9UHD4 219 aa15.08■□□□□ 0
LSM6-201ENST00000296581 ZNF490Q9ULM2 529 aaPredicted RBP15.08■□□□□ 0
LSM6-201ENST00000296581 SNX6Q9UNH7 406 aa15.08■□□□□ 0
LSM6-201ENST00000296581 SERTM1A2A2V5 107 aa15.08■□□□□ 0
LSM6-201ENST00000296581 JUPP14923 745 aa15.08■□□□□ 0
LSM6-201ENST00000296581 CHIT1Q13231 466 aa15.08■□□□□ 0
LSM6-201ENST00000296581 E2F2Q14209 437 aa15.08■□□□□ 0
LSM6-201ENST00000296581 NR6A1Q15406 480 aa15.08■□□□□ 0
LSM6-201ENST00000296581 PDCD4Q53EL6 469 aaKnown RBP15.08■□□□□ 0
LSM6-201ENST00000296581 PYCR3Q53H96 274 aa15.08■□□□□ 0
LSM6-201ENST00000296581 HABP4Q5JVS0 413 aaKnown RBP15.08■□□□□ 0
LSM6-201ENST00000296581 PGM2L1Q6PCE3 622 aa15.08■□□□□ 0
LSM6-201ENST00000296581 C16orf89Q6UX73 402 aa15.08■□□□□ 0
LSM6-201ENST00000296581 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.08■□□□□ 0
LSM6-201ENST00000296581 LRRC56Q8IYG6 542 aaPredicted RBP15.08■□□□□ 0
LSM6-201ENST00000296581 DEFB107AQ8IZN7 70 aa15.08■□□□□ 0
LSM6-201ENST00000296581 FNDC5Q8NAU1 212 aa15.08■□□□□ 0
LSM6-201ENST00000296581 TFGQ92734 400 aaPredicted RBP15.08■□□□□ 0
LSM6-201ENST00000296581 MED8Q96G25 268 aa15.08■□□□□ 0
LSM6-201ENST00000296581 SGPP1Q9BX95 441 aa15.08■□□□□ 0
LSM6-201ENST00000296581 FAM192AQ9GZU8 254 aa15.08■□□□□ 0
LSM6-201ENST00000296581 DENND2DQ9H6A0 471 aaPredicted RBP15.08■□□□□ 0
LSM6-201ENST00000296581 NDE1Q9NXR1 346 aa15.08■□□□□ 0
LSM6-201ENST00000296581 GPRC5BQ9NZH0 403 aa15.08■□□□□ 0
LSM6-201ENST00000296581 ASF1AQ9Y294 204 aa15.08■□□□□ 0
LSM6-201ENST00000296581 LATO43561 262 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms