RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 INVSQ9Y283 1065 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 FADS3Q9Y5Q0 445 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 MTCL1Q9Y4B5 1905 aaKnown RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 H0YJX3 145 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 GFYI3L273 518 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 KPNA3O00505 521 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 GSTA4O15217 222 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 NUAK1O60285 661 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 HIST1H2AGP0C0S8 130 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 HIST1H2ADP20671 130 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PTPN6P29350 595 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 MTHFRP42898 656 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 NAE1Q13564 534 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 RUNDC3AQ59EK9 446 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 TTC33Q6PID6 262 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 PARS2Q7L3T8 475 aaKnown RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 STK32CQ86UX6 486 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 TBC1D21Q8IYX1 336 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 ITCHQ96J02 903 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 HIST1H2AHQ96KK5 128 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 HIST1H2AJQ99878 128 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 H2AFJQ9BTM1 129 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 C9orf16Q9BUW7 83 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PRM3Q9NNZ6 103 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 EXD2Q9NVH0 621 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PKD2L2Q9NZM6 624 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PRKAB1Q9Y478 270 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 PCYT1BQ9Y5K3 369 aaPredicted RBP11.45□□□□□ -0.58
RHO-201ENST00000296271 VCANP13611 3396 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 TRIOO75962 3097 aa11.45□□□□□ -0.58
RHO-201ENST00000296271 SMIM31A0A1B0GVY4 71 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 C16orf96A6NNT2 1141 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 PRRT4C9JH25 899 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 KRT6AP02538 564 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 GBAP04062 536 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 KRT6BP04259 564 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 CDH1P12830 882 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 VIPR1P32241 457 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 SHMT2P34897 504 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 POLR2IP36954 125 aaKnown RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 KRT6CP48668 564 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 CLCN2P51788 898 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 MAPK10P53779 464 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 LSAMPQ13449 338 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 ACOX1Q15067 660 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 HENMT1Q5T8I9 393 aaKnown RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 CLECL1Q8IZS7 167 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 C2orf73Q8N5S3 287 aaPredicted RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 VN1R2Q8NFZ6 395 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 NCLNQ969V3 563 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 BARD1Q99728 777 aaKnown RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 DPH2Q9BQC3 489 aaPredicted RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 EMILIN2Q9BXX0 1053 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 PCDHGA11Q9Y5H2 935 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 LRRK1Q38SD2 2015 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 GRXCR1A8MXD5 290 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 CXCR6O00574 342 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 AXIN1O15169 862 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 SPINT1O43278 529 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 DIRAS1O95057 198 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 SLC16A8O95907 504 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 MSH3P20585 1137 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 NR1H2P55055 460 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 DHCR24Q15392 516 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 XKR6Q5GH73 641 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 TMTC4Q5T4D3 741 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 ELMSAN1Q6PJG2 1045 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 RAVER1Q8IY67 606 aaKnown RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 MUS81Q96NY9 551 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 KAT8Q9H7Z6 458 aaKnown RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 CERS4Q9HA82 394 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 IL23AQ9NPF7 189 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 SMPD3Q9NY59 655 aaPredicted RBP11.44□□□□□ -0.58
RHO-201ENST00000296271 AASSQ9UDR5 926 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 MAGEL2Q9UJ55 1249 aa11.44□□□□□ -0.58
RHO-201ENST00000296271 TRBV5-3A0A0A0MS03 114 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 TLL1O43897 1013 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 FOXD2O60548 495 aaPredicted RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 FGBP02675 491 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 CYP17A1P05093 508 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 CBSLP0DN79 551 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 CDH2P19022 906 aaPredicted RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 MYF6P23409 242 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 CBSP35520 551 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 MEF2AQ02078 507 aaPredicted RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 DOC2AQ14183 400 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 PON2Q15165 354 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 AASDHQ4L235 1098 aaPredicted RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 IRAK1BP1Q5VVH5 260 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 FRG2Q64ET8 278 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 LIPIQ6XZB0 460 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 METTL3Q86U44 580 aaKnown RBP11.43□□□□□ -0.58
RHO-201ENST00000296271 PROSER1Q86XN7 944 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 DHRSXQ8N5I4 330 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 GPR156Q8NFN8 814 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 OR8J3Q8NGG0 315 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 FAM162AQ96A26 154 aa11.43□□□□□ -0.58
RHO-201ENST00000296271 FRG2BQ96QU4 278 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms