RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 PCID2Q5JVF3 399 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 PTRHD1Q6GMV3 140 aaKnown RBP18.82■□□□□ 0.6
CXCL3-201ENST00000296026 TTC23LQ6PF05 361 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 FIGLAQ6QHK4 219 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 OVCH1Q7RTY7 1134 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 TM9SF4Q92544 642 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 FKBP10Q96AY3 582 aa18.82■□□□□ 0.6
CXCL3-201ENST00000296026 ILKAPQ9H0C8 392 aaPredicted RBP18.82■□□□□ 0.6
CXCL3-201ENST00000296026 DSCR3O14972 297 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 ZSCAN5DPP0CG00 497 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 PIM1P11309 404 aaPredicted RBP18.81■□□□□ 0.6
CXCL3-201ENST00000296026 MMP11P24347 488 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 MCM3P25205 808 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 RPL22P35268 128 aaKnown RBP18.81■□□□□ 0.6
CXCL3-201ENST00000296026 SESN2P58004 480 aaPredicted RBP18.81■□□□□ 0.6
CXCL3-201ENST00000296026 AIMP2Q13155 320 aaKnown RBP18.81■□□□□ 0.6
CXCL3-201ENST00000296026 GRM7Q14831 915 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 ZADH2Q8N4Q0 377 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 GSDMBQ8TAX9 411 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 RAD51AP1Q96B01 352 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 NACC2Q96BF6 587 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 PANX3Q96QZ0 392 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 RAB11FIP5Q9BXF6 653 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 P2RY12Q9H244 342 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 WDR54Q9H977 334 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 ZBTB20Q9HC78 741 aaPredicted RBP18.81■□□□□ 0.6
CXCL3-201ENST00000296026 CUTCQ9NTM9 273 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 CDC23Q9UJX2 597 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 GUCA1BQ9UMX6 200 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 NUP210LQ5VU65 1888 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 ICE1Q9Y2F5 2266 aa18.81■□□□□ 0.6
CXCL3-201ENST00000296026 PRICKLE3O43900 615 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-201ENST00000296026 CBX6O95503 412 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 ONECUT2O95948 504 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 ALBP02768 609 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 ITGA3P26006 1051 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 CRADDP78560 199 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 NKG7Q16617 165 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 TCTE1Q5JU00 501 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 YOD1Q5VVQ6 348 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-201ENST00000296026 SPC24Q8NBT2 197 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 SKA2Q8WVK7 121 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-201ENST00000296026 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-201ENST00000296026 INPP5DQ92835 1189 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 SPSB2Q99619 263 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 SELENOSQ9BQE4 189 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 SLC6A20Q9NP91 592 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 TREX1Q9NSU2 369 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 GNPTGQ9UJJ9 305 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 FBXL4Q9UKA2 621 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 TTC7AQ9ULT0 858 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-201ENST00000296026 NFS1Q9Y697 457 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 SPTAN1Q13813 2472 aaKnown RBP18.8■□□□□ 0.6
CXCL3-201ENST00000296026 RP1L1Q8IWN7 2480 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-201ENST00000296026 ANKRD12Q6UB98 2062 aa18.8■□□□□ 0.6
CXCL3-201ENST00000296026 PCM1Q15154 2024 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 A1L4Q6 167 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 KPNA5O15131 536 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 ALOX12BO75342 701 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 NDUFS3O75489 264 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 FKBP9O95302 570 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 C1orf105O95561 183 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 DDAH2O95865 285 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 BDKRB1P46663 353 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 CCSMST1Q4G0I0 132 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 Q6ZS92 163 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 COX15Q7KZN9 410 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 OTOAQ7RTW8 1153 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 GAS2L3Q86XJ1 694 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 TTC29Q8NA56 475 aaPredicted RBP18.79■□□□□ 0.6
CXCL3-201ENST00000296026 UBE2Q2Q8WVN8 375 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 ZUFSPQ96AP4 578 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 ZNF285Q96NJ3 590 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 TSGA10Q9BZW7 698 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 SLC26A1Q9H2B4 701 aa18.79■□□□□ 0.6
CXCL3-201ENST00000296026 EIF2B3Q9NR50 452 aaKnown RBP18.79■□□□□ 0.6
CXCL3-201ENST00000296026 RUVBL2Q9Y230 463 aaKnown RBP18.79■□□□□ 0.6
CXCL3-201ENST00000296026 COPG1Q9Y678 874 aaKnown RBP18.79■□□□□ 0.6
CXCL3-201ENST00000296026 KRT87PA6NCN2 255 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 TARM1B6A8C7 271 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 SOCS6O14544 535 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 CTSVO60911 334 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 RPS3P23396 243 aaKnown RBP eCLIP18.78■□□□□ 0.6
CXCL3-201ENST00000296026 PSMB5P28074 263 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 NMBRP28336 390 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 OR1D4P47884 311 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 GLRBP48167 497 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 EIF3BP55884 814 aaKnown RBP18.78■□□□□ 0.6
CXCL3-201ENST00000296026 VSX2P58304 361 aaPredicted RBP18.78■□□□□ 0.6
CXCL3-201ENST00000296026 BASP1P80723 227 aaKnown RBP18.78■□□□□ 0.6
CXCL3-201ENST00000296026 RPS6KA1Q15418 735 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 SIX1Q15475 284 aaPredicted RBP18.78■□□□□ 0.6
CXCL3-201ENST00000296026 CCNG2Q16589 344 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 FAM214AQ32MH5 1076 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 CRB2Q5IJ48 1285 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 PRAMEF13Q5VWM6 474 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 SHISA6Q6ZSJ9 500 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 CUZD1Q86UP6 607 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 LRRC6Q86X45 466 aa18.78■□□□□ 0.6
CXCL3-201ENST00000296026 MPP5Q8N3R9 675 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms