RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 DDX39BQ13838 428 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 AP1ARQ63HQ0 302 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 CYP2U1Q7Z449 544 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 MICU2Q8IYU8 434 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 MCOLN3Q8TDD5 553 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 CEP44Q9C0F1 390 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 SPHK2Q9NRA0 654 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 TDP1Q9NUW8 608 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 KLHL42Q9P2K6 505 aa17.86■□□□□ 0.45
SHKBP1-201ENST00000291842 TRBV5-3A0A0A0MS03 114 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 A0A1W2PQ67 120 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 FADS2P1A8MWK0 482 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 GFYI3L273 518 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 MOSPD3O75425 235 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 CYP2A7P20853 494 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 SHMT2P34897 504 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 PFN3P60673 137 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 CTBSQ01459 385 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 SLC14A1Q13336 389 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 DAG1Q14118 895 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 PON2Q15165 354 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 OR4F3Q6IEY1 312 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 USP51Q70EK9 711 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 ZDHHC13Q8IUH4 622 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 AADATQ8N5Z0 425 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 FAM120BQ96EK7 910 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 NPLQ9BXD5 320 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 DNAJC11Q9NVH1 559 aa17.85■□□□□ 0.45
SHKBP1-201ENST00000291842 CREG1O75629 220 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 PRSS23O95084 383 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 SERPINA1P01009 418 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 TIMP1P01033 207 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 CTSLP07711 333 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 PREPP48147 710 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 SH3BGRP55822 239 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 ESRRGP62508 458 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 PMS2P3Q13401 168 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 CBX2Q14781 532 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 FRG2Q64ET8 278 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 CDC26Q8NHZ8 85 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 FRG2BQ96QU4 278 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 MTERF1Q99551 399 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 SH3GL1Q99961 368 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 CDC14AQ9UNH5 594 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 ERVW-1Q9UQF0 538 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 U3KQV3 271 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 PRKACGP22612 351 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 HNMTP50135 292 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 CCSMST1Q4G0I0 132 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 CDKL4Q5MAI5 379 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 PLEKHS1Q5SXH7 462 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 ZDHHC20Q5W0Z9 365 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 TCAIMQ8N3R3 496 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 L3MBTL4Q8NA19 623 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 ZSWIM3Q96MP5 696 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 HEPHQ9BQS7 1158 aa17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 CPPED1Q9BRF8 314 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 TUBA8Q9NY65 449 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-201ENST00000291842 MPC1LP0DKB6 136 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 THRBP10828 461 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 AMD1P17707 334 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 POLR2EP19388 210 aaKnown RBP17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 CD22P20273 847 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 EFNA1P20827 205 aaPredicted RBP17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 VIPR1P32241 457 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 GGTA1PQ4G0N0 100 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 ZNF697Q5TEC3 545 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 DOK6Q6PKX4 331 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 OR7A2PQ8NGA2 310 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 CMTM7Q96FZ5 175 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 MED8Q96G25 268 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 KCNH6Q9H252 994 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 TOR3AQ9H497 397 aa17.83■□□□□ 0.45
SHKBP1-201ENST00000291842 TRIM64CA6NLI5 447 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 EIF3FO00303 357 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 TSPAN6O43657 245 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 ERN1O75460 977 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 RHOP08100 348 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 TIMP2P16035 220 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 PTPN6P29350 595 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 CTSCP53634 463 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 IRF8Q02556 426 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 NEDD8Q15843 81 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 ADNP2Q6IQ32 1131 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 NOXRED1Q6NXP6 359 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 SPESP1Q6UW49 350 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 ZNF551Q7Z340 670 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 TMEM179BQ7Z7N9 219 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 TMEM132CQ8N3T6 1108 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 ING5Q8WYH8 240 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 PAWRQ96IZ0 340 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 ITCHQ96J02 903 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 POLR1BQ9H9Y6 1135 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 DCAF13Q9NV06 445 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 IFT80Q9P2H3 777 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 DNAJB9Q9UBS3 223 aa17.83■□□□□ 0.44
SHKBP1-201ENST00000291842 ITM2BQ9Y287 266 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms