RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 DCTN2Q13561 401 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 TOMM20Q15388 145 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ZBTB6Q15916 424 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ZSWIM7Q19AV6 140 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 MYLK3Q32MK0 819 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ARMC4Q5T2S8 1044 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 RSBN1Q5VWQ0 802 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 LYPLAL1Q5VWZ2 237 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 KRT78Q8N1N4 520 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SFRP1Q8N474 314 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 DTX3Q8N9I9 347 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SLC43A3Q8NBI5 491 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 OR2AP1Q8NGE2 309 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 BIRC7Q96CA5 298 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 HSPBAP1Q96EW2 488 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 EPS8L2Q9H6S3 715 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CXorf21Q9HAI6 301 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 TAC3Q9UHF0 121 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ACSL6Q9UKU0 697 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 EFCAB10A6NFE3 127 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 B4GAT1O43505 415 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SNNO75324 88 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 TRMUO75648 421 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 IFNA14P01570 189 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 FYNP06241 537 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ATP1B2P14415 290 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 CLCNKAP51800 687 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PTSQ03393 145 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 MERTKQ12866 999 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 TAB1Q15750 504 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ADRM1Q16186 407 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ZNF542PQ5EBM4 170 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PDZK1Q5T2W1 519 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NANOGP8Q6NSW7 305 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ENPP6Q6UWR7 440 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 XKR5Q6UX68 686 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PRR23BQ6ZRT6 265 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PLEKHM3Q6ZWE6 761 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 METTL27Q8N6F8 245 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 CENPIQ92674 756 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 RAB8BQ92930 207 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ASB9Q96DX5 294 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 IGSF21Q96ID5 467 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SLC22A12Q96S37 553 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 FNDC11Q9BVV2 318 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 DPEP2Q9H4A9 486 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NANOGQ9H9S0 305 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PREBQ9HCU5 417 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 POLE4Q9NR33 117 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 IGSF5Q9NSI5 407 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 RAB26Q9ULW5 256 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PPIEQ9UNP9 301 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 DMTF1Q9Y222 760 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 DNAJC15Q9Y5T4 150 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 DNAH12Q6ZR08 3092 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 BBIP1A8MTZ0 92 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PCDH7O60245 1069 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ENO2P09104 434 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 HOXB8P17481 243 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 PPM1AP35813 382 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SRP54P61011 504 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 C1DQ13901 141 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 SLC9A5Q14940 896 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 GTDC1Q4AE62 458 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 KHDRBS2Q5VWX1 349 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 CXorf57Q6NSI4 855 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 MED27Q6P2C8 311 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ISCA2Q86U28 154 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ARHGAP12Q8IWW6 846 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 TMEM145Q8NBT3 493 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 WDR36Q8NI36 951 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 PMEPA1Q969W9 287 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 C8orf48Q96LL4 319 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 GAL3ST1Q99999 423 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 MACROD1Q9BQ69 325 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ATAD3AQ9NVI7 634 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 TRNAU1APQ9NX07 287 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 FZD4Q9ULV1 537 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NCKAP1Q9Y2A7 1128 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 WNK3Q9BYP7 1800 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 SMIM31A0A1B0GVY4 71 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CLIC1O00299 241 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 RTCAO00442 366 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 TSPAN6O43657 245 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PGLSO95336 258 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 DNTTP04053 509 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PGRP06401 933 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 OGNP20774 298 aaKnown RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 MTAPQ13126 283 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 FAM180AQ6UWF9 173 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CPA6Q8N4T0 437 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 PSD4Q8NDX1 1056 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NFKBIDQ8NI38 313 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CNIH3Q8TBE1 160 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 CEP295NLQ96MC4 621 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 RMI1Q9H9A7 625 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 ITM2CQ9NQX7 267 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NLE1Q9NVX2 485 aaPredicted RBP4.67□□□□□ -1.66
UBR1-201ENST00000290650 SLC45A1Q9Y2W3 748 aa4.67□□□□□ -1.66
UBR1-201ENST00000290650 NUMBLQ9Y6R0 609 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms