RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 FDXRP22570 491 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SSTR1P30872 391 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SHMT2P34897 504 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 CARSP49589 748 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SEPHS1P49903 392 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 RAB28P51157 221 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 MAPK10P53779 464 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 CSE1LP55060 971 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 YBX1P67809 324 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SLC7A5Q01650 507 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 THOC5Q13769 683 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 MAP7Q14244 749 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 KCNAB1Q14722 419 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 COL28A1Q2UY09 1125 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 KLHL38Q2WGJ6 581 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 DCAF12Q5T6F0 453 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 UBAP2Q5T6F2 1119 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF385CQ66K41 422 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 IRGCQ6NXR0 463 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 INO80CQ6PI98 192 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 PAQR3Q6TCH7 311 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SPESP1Q6UW49 350 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 ZC3HC1Q86WB0 502 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 DCUN1D3Q8IWE4 304 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 DNAJC22Q8N4W6 341 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 ZBTB2Q8N680 514 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SIDT2Q8NBJ9 832 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 OR2L8Q8NGY9 312 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 RAD51AP1Q96B01 352 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 FAM136AQ96C01 138 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF285Q96NJ3 590 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 IL17FQ96PD4 163 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 OR6C1Q96RD1 312 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 GPR21Q99679 349 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 OLFM1Q99784 485 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 CTRCQ99895 268 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 FAM167BQ9BTA0 163 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 HGH1Q9BTY7 390 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SAP130Q9H0E3 1048 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 DPH5Q9H2P9 285 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 SYNPO2LQ9H987 977 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 IKZF3Q9UKT9 509 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 PLAGL1Q9UM63 463 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 VWA7Q9Y334 891 aa8.84□□□□□ -0.99
HMGN1-201ENST00000288344 TLN1Q9Y490 2541 aaKnown RBP8.84□□□□□ -0.99
HMGN1-201ENST00000288344 IGKV1-8A0A0C4DH67 115 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 TCRBV9S1A1TA0A576 114 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 PIPSLA2A3N6 862 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 HMX2A2RU54 273 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 FAM159BA6NKW6 160 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 PIAS1O75925 651 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CAPN1P07384 714 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 EBLN1P0CF75 366 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CBSLP0DN79 551 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 PVRP15151 417 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 UGT2B7P16662 529 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CHRM3P20309 590 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 F8A1P23610 371 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CBSP35520 551 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 PLTPP55058 493 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CAV1Q03135 178 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 MGAT5Q09328 741 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 FASTKQ14296 549 aaKnown RBP8.83□□□□□ -1
HMGN1-201ENST00000288344 KIR2DS3Q14952 304 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 SLC5A12Q1EHB4 618 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 DNTTIP2Q5QJE6 756 aaKnown RBP8.83□□□□□ -1
HMGN1-201ENST00000288344 FCRL6Q6DN72 434 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 PWWP2BQ6NUJ5 590 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 FBXO42Q6P3S6 717 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 FOXR1Q6PIV2 292 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 C19orf48Q6RUI8 117 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CEACAM20Q6UY09 585 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CDHR3Q6ZTQ4 885 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 SLC26A11Q86WA9 606 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 GSDMBQ8TAX9 411 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 EEF1AKMT1Q8WVE0 214 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 KCNE4Q8WWG9 221 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 PKP4Q99569 1192 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 NDNQ99608 321 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 TSSK1BQ9BXA7 367 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 SLC12A9Q9BXP2 914 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 L2HGDHQ9H9P8 463 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 FGF21Q9NSA1 209 aa8.83□□□□□ -1
HMGN1-201ENST00000288344 CORO1CQ9ULV4 474 aaPredicted RBP8.83□□□□□ -1
HMGN1-201ENST00000288344 MDC1Q14676 2089 aaKnown RBP8.83□□□□□ -1
HMGN1-201ENST00000288344 LOC101059948A0A1B0GTJ6 334 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 TEX51A0A1B0GUA7 166 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 ESYT3A0FGR9 886 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 C2orf74A8MZ97 194 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 E7ENX8 843 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 STMND1H3BQB6 276 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 KIF2AO00139 706 aaPredicted RBP8.82□□□□□ -1
HMGN1-201ENST00000288344 CDK2AP1O14519 115 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 NDC80O14777 642 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 PFDN6O15212 129 aa8.82□□□□□ -1
HMGN1-201ENST00000288344 RRP8O43159 456 aaKnown RBP8.82□□□□□ -1
HMGN1-201ENST00000288344 KLK10O43240 276 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms