RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 CDH9Q9ULB4 789 aa3.81□□□□□ -1.8
SREK1-201ENST00000284041 MRPS2Q9Y399 296 aaKnown RBP3.81□□□□□ -1.8
SREK1-201ENST00000284041 LAMC3Q9Y6N6 1575 aa3.81□□□□□ -1.8
SREK1-201ENST00000284041 MROH7-TTC4A0A0A0MT08 1334 aa3.81□□□□□ -1.8
SREK1-201ENST00000284041 PHLPP2Q6ZVD8 1323 aa3.81□□□□□ -1.8
SREK1-201ENST00000284041 A0A1W2PN81 502 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 WDR27A2RRH5 827 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 DNALI1O14645 258 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 RRHO14718 337 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TRAPPC3O43617 180 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PRDM1O75626 825 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 SCAF4O95104 1147 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 GLAP06280 429 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 CRHP06850 196 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 FURINP09958 794 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 GHRP10912 638 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 DDX5P17844 614 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 TYMPP19971 482 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 CHRNA7P36544 502 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TAGLN2P37802 199 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 IGHMBP2P38935 993 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 CEACAM6P40199 344 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PNLIPRP2P54317 469 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 AP1S1P61966 158 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 KLC1Q07866 573 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 EFTUD2Q15029 972 aaKnown RBP eCLIP3.8□□□□□ -1.8
SREK1-201ENST00000284041 ASPHD1Q5U4P2 390 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PTRHD1Q6GMV3 140 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 TSSK4Q6SA08 328 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TMEM270Q6UE05 265 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 RTL4Q6ZR62 310 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 MSANTD1Q6ZTZ1 278 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PRRT2Q7Z6L0 340 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 HAPLN4Q86UW8 402 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 FAM9CQ8IZT9 166 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ARFGAP2Q8N6H7 521 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ZCCHC10Q8TBK6 192 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 FNDC8Q8TC99 324 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ADAD1Q96M93 576 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 TCEANC2Q96MN5 208 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PRICKLE1Q96MT3 831 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 DIRC2Q96SL1 478 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ACTRT3Q9BYD9 372 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 KRT23Q9C075 422 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 SLITRK6Q9H5Y7 841 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 CNOT10Q9H9A5 744 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 KCTD3Q9Y597 815 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 UMODL1Q5DID0 1318 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PRAG1Q86YV5 1406 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 MBD5Q9P267 1494 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 DUOX2Q9NRD8 1548 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 QRICH2Q9H0J4 1663 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3DA0A087WVF3 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3IA0A087WXS9 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3EA0A087X179 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3KA0A087X1G2 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 A0A1W2PPC1 479 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3BA6NDS4 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3FA6NER0 549 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 ZSCAN5BA6NJL1 495 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3LB9A6J9 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 BCAT2O15382 392 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 FOXS1O43638 330 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PRICKLE3O43900 615 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 KLK8O60259 260 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 LPXNO60711 386 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 NOS1APO75052 506 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 RHBDL1O75783 438 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 CLTAP09496 248 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3HP0C7X1 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TACR3P29371 465 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ACTR1BP42025 376 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 MEOX1P50221 254 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ZNF84P51523 738 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 NLRP11P59045 1033 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 SPCS3P61009 180 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 PRAMEP78395 509 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 RESTQ13127 1097 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 USP10Q14694 798 aaKnown RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 PHKG1Q16816 387 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3GQ6DHY5 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3CQ6IPX1 549 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 SLC27A1Q6PCB7 646 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 CDKL3Q8IVW4 592 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 MCOLN2Q8IZK6 566 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 TBC1D3Q8IZP1 549 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 PIGKQ92643 395 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 FAM162AQ96A26 154 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ERLEC1Q96DZ1 483 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 NPAS1Q99742 590 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 SLC29A1Q99808 456 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ACBD6Q9BR61 282 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 EDEM2Q9BV94 578 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 KAT14Q9H8E8 782 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 ACTR5Q9H9F9 607 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 MYOZ1Q9NP98 299 aaPredicted RBP3.8□□□□□ -1.8
SREK1-201ENST00000284041 PTTG2Q9NZH5 202 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 MPP6Q9NZW5 540 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 BTBD3Q9Y2F9 522 aa3.8□□□□□ -1.8
SREK1-201ENST00000284041 NR2E1Q9Y466 385 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms