RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PDHA2P29803 388 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 AQP1P29972 269 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 NUDT1P36639 197 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 KCNJ2P63252 427 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 HSD11B2P80365 405 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 FOXK1P85037 733 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ARFRP1Q13795 201 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF630Q2M218 657 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-201ENST00000283254 PRAMEF14Q5SWL7 426 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 SDHAF4Q5VUM1 108 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 PRAMEF13Q5VWM6 474 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 CXorf57Q6NSI4 855 aaKnown RBP3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF662Q6ZS27 426 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ARMC10Q8N2F6 343 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 UBE2J2Q8N2K1 259 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 CHCHD4Q8N4Q1 142 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF615Q8N8J6 731 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF709Q8N972 641 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 OR6K2Q8NGY2 324 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ING5Q8WYH8 240 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 ELMO3Q96BJ8 720 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 KLHL5Q96PQ7 755 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 PCDHB18PQ96TA0 734 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 SLC39A3Q9BRY0 314 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 WDR6Q9NNW5 1121 aaKnown RBP3.99□□□□□ -1.77
SCN3A-201ENST00000283254 RAB26Q9ULW5 256 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 YIPF1Q9Y548 306 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 SNX10Q9Y5X0 201 aa3.99□□□□□ -1.77
SCN3A-201ENST00000283254 A0A0G2JMP0 313 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 TSPAN1O60635 241 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 RAD51DO75771 328 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 AP2A2O94973 939 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 F8A1P23610 371 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 BRCC3P46736 316 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PTDSS1P48651 473 aaKnown RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 AP2S1P53680 142 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PLA2G16P53816 162 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 HERV-K104P61576 105 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 CLCQ05315 142 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 UAP1L1Q3KQV9 507 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 C2orf27AQ580R0 203 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 C1orf189Q5VU69 101 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 RPL13AP3Q6NVV1 102 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 TMEM220Q6QAJ8 160 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 KLHL36Q8N4N3 616 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PRELID2Q8N945 189 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 OR4M2Q8NGB6 313 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 COPS5Q92905 334 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 RAB7BQ96AH8 199 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ERLEC1Q96DZ1 483 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 KLHDC7BQ96G42 594 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 NECAB3Q96P71 396 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 USB1Q9BQ65 265 aaKnown RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 GTPBP2Q9BX10 602 aaKnown RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 POLR3BQ9NW08 1133 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 P2RX2Q9UBL9 471 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 FAM198AQ9UFP1 575 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PLEKHA6Q9Y2H5 1048 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 DEPDC5O75140 1603 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ARL5CA6NH57 179 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 DUX1O43812 170 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 GP1BBP13224 206 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PFKLP17858 780 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ACSL1P33121 698 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 GBX2P52951 348 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 GSTM4Q03013 218 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 CYP4F3Q08477 520 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 MERTKQ12866 999 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF234Q14588 700 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 IL23RQ5VWK5 629 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 KCTD8Q6ZWB6 473 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 SLCO6A1Q86UG4 719 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 CFAP206Q8IYR0 622 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 KLHL32Q96NJ5 620 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 CCDC115Q96NT0 180 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ATG10Q9H0Y0 220 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 EVLQ9UI08 416 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ACSL5Q9ULC5 683 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 A0A1B0GVC2 190 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PRR5-ARHGAP8B1AHC4 643 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 MFSD11O43934 449 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 CPNE3O75131 537 aaKnown RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 MT-CYBP00156 380 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 TNFP01375 233 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 TIE1P35590 1138 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PGDP52209 483 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 SEC13P55735 322 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 CD47Q08722 323 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 TUBA3CQ13748 450 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PON3Q15166 354 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 ASTE1Q2TB18 679 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-201ENST00000283254 GFOD2Q3B7J2 385 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 FAM174BQ3ZCQ3 159 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 SMARCD3Q6STE5 483 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 AHSA2Q719I0 299 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 PQLC1Q8N2U9 271 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 HORMAD2Q8N7B1 307 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 MFSD2AQ8NA29 543 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 FAM47BQ8NA70 645 aa3.98□□□□□ -1.77
SCN3A-201ENST00000283254 VANGL1Q8TAA9 524 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms