RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PREBQ9HCU5 417 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 DNAJC11Q9NVH1 559 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 A0A1W2PP18 115 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 FAM234BA2RU67 622 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 SLC28A1O00337 649 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 STK25O00506 426 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 NME4O00746 187 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 RSL1D1O76021 490 aaKnown RBP20.37■□□□□ 0.85
YBX3-202ENST00000279550 PFN3P60673 137 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 RPL38P63173 70 aaKnown RBP20.37■□□□□ 0.85
YBX3-202ENST00000279550 TLR1Q15399 786 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 CPSF6Q16630 551 aaKnown RBP eCLIP20.37■□□□□ 0.85
YBX3-202ENST00000279550 TMEM259Q4ZIN3 620 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 COQ5Q5HYK3 327 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 SLC22A15Q8IZD6 547 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 RGL4Q8IZJ4 473 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 TSPEARQ8WU66 669 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 PPP3R2Q96LZ3 170 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 OSBPL6Q9BZF3 934 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 ATXN10Q9UBB4 475 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 SLC22A14Q9Y267 594 aa20.37■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3DA0A087WVF3 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3IA0A087WXS9 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3EA0A087X179 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3KA0A087X1G2 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 PABPN1LA6NDY0 278 aaKnown RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3FA6NER0 549 aaPredicted RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3LB9A6J9 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 RGS14O43566 566 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 ULK1O75385 1050 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 EEDO75530 441 aaKnown RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3HP0C7X1 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TRIM25Q14258 630 aaKnown RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 PLA2G4EQ3MJ16 856 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TIGD2Q4W5G0 525 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 SAMD4BQ5PRF9 694 aaKnown RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 C6orf10Q5SRN2 563 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3GQ6DHY5 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3CQ6IPX1 549 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 ANO7Q6IWH7 933 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 ZFAND4Q86XD8 727 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TBC1D3Q8IZP1 549 aaPredicted RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 PGBD3Q8N328 593 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 ASB9Q96DX5 294 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TRIM8Q9BZR9 551 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 EPHX3Q9H6B9 360 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 ITM2CQ9NQX7 267 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 CMTM6Q9NX76 183 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 USP36Q9P275 1121 aaKnown RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 EBF1Q9UH73 591 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 A0A1W2PQU0 124 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 DNAJA2O60884 412 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 RNGTTO60942 597 aaKnown RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 PDYNP01213 254 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 FGL2Q14314 439 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 GGTA1PQ4G0N0 100 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 SLC15A3Q8IY34 581 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 MINDY1Q8N5J2 469 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 L3MBTL4Q8NA19 623 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 TSTD1Q8NFU3 115 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 CLDN23Q96B33 292 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 LRRC58Q96CX6 371 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 NAF1Q96HR8 494 aaKnown RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 C1QTNF2Q9BXJ5 285 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 ABCD2Q9UBJ2 740 aa20.36■□□□□ 0.85
YBX3-202ENST00000279550 PCYT1BQ9Y5K3 369 aaPredicted RBP20.36■□□□□ 0.85
YBX3-202ENST00000279550 CCDC154A6NI56 674 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 PAK4O96013 591 aaPredicted RBP20.35■□□□□ 0.85
YBX3-202ENST00000279550 ATP6V1C1P21283 382 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 ACSL1P33121 698 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 NFYCQ13952 458 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 WSCD2Q2TBF2 565 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 MAP7D1Q3KQU3 841 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 LPCAT4Q643R3 524 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 HORMAD1Q86X24 394 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 TRAPPC5Q8IUR0 188 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 ZNF547Q8IVP9 402 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 PPFIBP2Q8ND30 876 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 HHIPQ96QV1 700 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 PKP4Q99569 1192 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 HOPXQ9BPY8 73 aaPredicted RBP20.35■□□□□ 0.85
YBX3-202ENST00000279550 ACPTQ9BZG2 426 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 BTBD1Q9H0C5 482 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 CHRDQ9H2X0 955 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 LRTM1Q9HBL6 345 aa20.35■□□□□ 0.85
YBX3-202ENST00000279550 MRPL40Q9NQ50 206 aaKnown RBP20.35■□□□□ 0.85
YBX3-202ENST00000279550 STOX2Q9P2F5 926 aaPredicted RBP20.35■□□□□ 0.85
YBX3-202ENST00000279550 KRT6AP02538 564 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 KRT6BP04259 564 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 ZNF8P17098 575 aaPredicted RBP20.34■□□□□ 0.85
YBX3-202ENST00000279550 SLC6A2P23975 617 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 MAP4P27816 1152 aaKnown RBP20.34■□□□□ 0.85
YBX3-202ENST00000279550 KRT6CP48668 564 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 NEK2P51955 445 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 SGCGQ13326 291 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 CMPK2Q5EBM0 449 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 PNCKQ6P2M8 343 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 PRMT9Q6P2P2 845 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 CRTC3Q6UUV7 619 aa20.34■□□□□ 0.85
YBX3-202ENST00000279550 SLC17A9Q9BYT1 436 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms