RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TMIGD1Q6UXZ0 262 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.654e-9■■■■■ 74.4
USP6NL-201ENST00000277575 CXXC5Q7LFL8 322 aaKnown RBP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TRIM74Q86UV6 250 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 LRRTM3Q86VH5 581 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TMEM130Q8N3G9 435 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 FAM110BQ8TC76 370 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 WDR60Q8WVS4 1066 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 SHDQ96IW2 340 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 MRGPRX2Q96LB1 330 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 SAMD11Q96NU1 681 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TUBGCP5Q96RT8 1024 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 CGREF1Q99674 301 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 RETREG1Q9H6L5 497 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 MAGEE1Q9HCI5 957 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 SIRPGQ9P1W8 387 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 MYH6P13533 1939 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 OAS1P00973 400 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ITGB1P05556 798 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 POU2F1P14859 743 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PTX3P26022 381 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 CCR10P46092 362 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 AVPR1BP47901 424 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PREPP48147 710 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PTPN5P54829 565 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PCDH1Q08174 1060 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RAB6CQ53S08 254 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 GPR65Q8IYL9 337 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PLD6Q8N2A8 252 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 UBASH3BQ8TF42 649 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 LRRC58Q96CX6 371 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RAB6CQ9H0N0 254 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ELL3Q9HB65 397 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 TMLHEQ9NVH6 421 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 FLRT1Q9NZU1 646 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 VIRMAQ69YN4 1812 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RGS10O43665 173 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 GMFGO60234 142 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 MAFKO60675 156 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RAP2AP10114 183 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 DHPSP49366 369 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 NCBP2P52298 156 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ACTR3P61158 418 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 HTRA3P83110 453 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 NFATC2Q13469 925 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 TAB1Q15750 504 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 KCTD21Q4G0X4 260 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ZNF805Q5CZA5 627 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 FAM91A1Q658Y4 838 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 OR4F3Q6IEY1 312 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RPS27LQ71UM5 84 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RANBP3LQ86VV4 465 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 FBXO15Q8NCQ5 510 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PEX13Q92968 403 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 GTPBP3Q969Y2 492 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 CMTM7Q96FZ5 175 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PLEKHG4BQ96PX9 1271 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 DPYSL5Q9BPU6 564 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 CTPS2Q9NRF8 586 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ZIM2Q9NZV7 527 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 COPS7AQ9UBW8 275 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RAB26Q9ULW5 256 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 IRGMA1A4Y4 181 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 H0YGN5 161 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 XKRYO14609 159 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 HCN1O60741 890 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 UBXN7O94888 489 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 CYP11A1P05108 521 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 KLK1P06870 262 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 CAPGP40121 348 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 LBX1P52954 281 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 CRISP3P54108 245 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 EEFSECP57772 596 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ZSWIM7Q19AV6 140 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 SPIN4Q56A73 249 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 GOLGA7Q7Z5G4 137 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 GSDMCQ9BYG8 508 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PRRG4Q9BZD6 226 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ADAM7Q9H2U9 754 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 TPK1Q9H3S4 243 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 IKZF2Q9UKS7 526 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 MKL2Q9ULH7 1088 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 SPATA2Q9UM82 520 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 SNX7Q9UNH6 387 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 NFS1Q9Y697 457 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PTPRZ1P23471 2315 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 DUXAA6NLW8 204 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 E7ESA3 106 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RFPL1O75677 317 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 OR5F1O95221 314 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 FADS2O95864 444 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 TNFP01375 233 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 ADARP55265 1226 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RAPSNQ13702 412 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 RAB33AQ14088 237 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PCLAFQ15004 111 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 XKR4Q5GH76 650 aa11.01□□□□□ -0.65
USP6NL-201ENST00000277575 PDE12Q6L8Q7 609 aaKnown RBP11.01□□□□□ -0.65
USP6NL-201ENST00000277575 HDDC2Q7Z4H3 204 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms