RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RCVRNP35243 200 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 RING1Q06587 406 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 CCDC71Q8IV32 467 aaPredicted RBP26.81■■□□□ 1.88
CBX4-201ENST00000269397 ZNF513Q8N8E2 541 aaPredicted RBP26.81■■□□□ 1.88
CBX4-201ENST00000269397 MCFD2Q8NI22 146 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 ACPTQ9BZG2 426 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 GLUD1P00367 558 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 HOXA9P31269 272 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 RPS14P62263 151 aaKnown RBP26.8■■□□□ 1.88
CBX4-201ENST00000269397 ARHGEF7Q14155 803 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 TMEM132CQ8N3T6 1108 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 TRPV1Q8NER1 839 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 NACA2Q9H009 215 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 ANKMY1Q9P2S6 941 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 EFCAB9A8MZ26 197 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 UPK3BL1B0FP48 263 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 UPK3BL2E5RIL1 263 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 ALDH7A1P49419 539 aaKnown RBP26.8■■□□□ 1.88
CBX4-201ENST00000269397 CACNG1Q06432 222 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 COLEC12Q5KU26 742 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 KDM4DQ6B0I6 523 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 SNX20Q7Z614 316 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 OR6K2Q8NGY2 324 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 IL17CQ9P0M4 197 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 Q9Y3F1 56 aa26.8■■□□□ 1.88
CBX4-201ENST00000269397 VLDLRP98155 873 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 MAD2L1BPQ15013 274 aaPredicted RBP26.79■■□□□ 1.88
CBX4-201ENST00000269397 FAM171A1Q5VUB5 890 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 ZCCHC8Q6NZY4 707 aaKnown RBP26.79■■□□□ 1.88
CBX4-201ENST00000269397 TRIM46Q7Z4K8 759 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 RHOXF1Q8NHV9 184 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 LATS2Q9NRM7 1088 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 PPT2Q9UMR5 302 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 OARD1Q9Y530 152 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 PLXNA4Q9HCM2 1894 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 TBX1O43435 398 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 NBNO60934 754 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 ERN1O75460 977 aaKnown RBP26.79■■□□□ 1.88
CBX4-201ENST00000269397 ARHGDIAP52565 204 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 NKX2-5P52952 324 aaPredicted RBP26.79■■□□□ 1.88
CBX4-201ENST00000269397 ATXN7L2Q5T6C5 722 aaPredicted RBP26.79■■□□□ 1.88
CBX4-201ENST00000269397 ATG16L2Q8NAA4 619 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 STARD8Q92502 1023 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 BCL7BQ9BQE9 202 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 KCNH6Q9H252 994 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 SIAEQ9HAT2 523 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 AMBNQ9NP70 447 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 KIF17Q9P2E2 1029 aa26.79■■□□□ 1.88
CBX4-201ENST00000269397 A8MX80 341 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 GJB5O95377 273 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 PRAMEF1O95521 474 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 PDYNP01213 254 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 PTPN6P29350 595 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 SERPINB1P30740 379 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 TGFBR2P37173 567 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 MAGEA2P43356 314 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 CREMQ03060 361 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 CLLU1OSQ5K130 101 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 RNF219Q5W0B1 726 aaPredicted RBP26.78■■□□□ 1.88
CBX4-201ENST00000269397 GLB1LQ6UWU2 654 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 Q6ZPB1 254 aaPredicted RBP26.78■■□□□ 1.88
CBX4-201ENST00000269397 STK40Q8N2I9 435 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 APOL4Q9BPW4 351 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 SIRT5Q9NXA8 310 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 AKR1A1P14550 325 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 CDH4P55283 916 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 DUSP4Q13115 394 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 PRSS36Q5K4E3 855 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 RSPO2Q6UXX9 243 aaPredicted RBP26.78■■□□□ 1.88
CBX4-201ENST00000269397 UTS2BQ765I0 119 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 ARMC8Q8IUR7 673 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 DCSTAMPQ9H295 470 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 SAMHD1Q9Y3Z3 626 aaKnown RBP26.78■■□□□ 1.88
CBX4-201ENST00000269397 PIKFYVEQ9Y2I7 2098 aa26.78■■□□□ 1.88
CBX4-201ENST00000269397 A0A096LPI6 279 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 EPB42P16452 691 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 CLK1P49759 484 aaKnown RBP26.77■■□□□ 1.88
CBX4-201ENST00000269397 PPP5CP53041 499 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 FAM189BP81408 668 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 ARF5P84085 180 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 KEAP1Q14145 624 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 OR4F3Q6IEY1 312 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 RNF19BQ6ZMZ0 732 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 DPH2Q9BQC3 489 aaPredicted RBP26.77■■□□□ 1.88
CBX4-201ENST00000269397 C6orf62Q9GZU0 229 aaPredicted RBP26.77■■□□□ 1.88
CBX4-201ENST00000269397 IL1RAPQ9NPH3 570 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 GKN1Q9NS71 199 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 KRT84Q9NSB2 600 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 AFF4Q9UHB7 1163 aaKnown RBP26.77■■□□□ 1.88
CBX4-201ENST00000269397 OSGIN1Q9UJX0 560 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 H7C0S8 307 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 PCDHGA12O60330 932 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 FKBP9O95302 570 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 LIPAP38571 399 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 EIF2DP41214 584 aaKnown RBP26.77■■□□□ 1.88
CBX4-201ENST00000269397 RGS4P49798 205 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 LRIF1Q5T3J3 769 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 LINC00299Q6ZSB3 139 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 HORMAD1Q86X24 394 aa26.77■■□□□ 1.88
CBX4-201ENST00000269397 RMND5AQ9H871 391 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms