RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 MIOSQ9NXC5 875 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 SLC45A1Q9Y2W3 748 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 PCDHGB2Q9Y5G2 931 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 MRPL42Q9Y6G3 142 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 STYXL1Q9Y6J8 313 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 ARPC4-TTLL3A0A0A6YYG9 625 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 SLC16A6O15403 523 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 ZBTB24O43167 697 aaPredicted RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 PCDHGA12O60330 932 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 RPS3P23396 243 aaKnown RBP eCLIP8.57□□□□□ -1.044e-6■■■■■ 40.4
VAPB-201ENST00000265619 HMGCLP35914 325 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 DAPP51397 102 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 GPR85P60893 370 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 TIGD6Q17RP2 521 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 TMEM207Q6UWW9 146 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 DET1Q7L5Y6 550 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 PLPPR4Q7Z2D5 763 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 PLCZ1Q86YW0 608 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 LILRB2Q8N423 598 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 C9orf62Q8N4C0 152 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 AMER2Q8N7J2 671 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 ZNF366Q8N895 744 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 TWIST2Q8WVJ9 160 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 NDRG1Q92597 394 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 RBM4BQ9BQ04 359 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 SEC22CQ9BRL7 303 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 RBM4Q9BWF3 364 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 NXF3Q9H4D5 531 aaKnown RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 SDR39U1Q9NRG7 319 aaPredicted RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.57□□□□□ -1.04
VAPB-201ENST00000265619 ATP6V1HQ9UI12 483 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 GPR45Q9Y5Y3 372 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 ALG5Q9Y673 324 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 AUP1Q9Y679 476 aa8.57□□□□□ -1.04
VAPB-201ENST00000265619 IGKV6D-21A0A0A0MT36 114 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 H3BM21 787 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 KIAA0513O60268 411 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 UGT2B17O75795 530 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SNX4O95219 450 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SERPINF2P08697 491 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 STMN1P16949 149 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SDHBP21912 280 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 CCNCP24863 283 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 HTR1EP28566 365 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SLC1A2P43004 574 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 NUDT6P53370 316 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 DNAJB13P59910 316 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 POLR2GP62487 172 aaKnown RBP eCLIP8.56□□□□□ -1.04
VAPB-201ENST00000265619 CHRNB3Q05901 458 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 PTPN11Q06124 597 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 CARD16Q5EG05 197 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 GARNL3Q5VVW2 1013 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 TYW3Q6IPR3 259 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 CREB3L2Q70SY1 520 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ZNF767PQ75MW2 155 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 HASPINQ8TF76 798 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 MARVELD3Q96A59 401 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SIPA1Q96FS4 1042 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 FAM129BQ96TA1 746 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 NAT9Q9BTE0 207 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ZCCHC4Q9H5U6 513 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ANKHQ9HCJ1 492 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 BRD7Q9NPI1 651 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 LIMD1Q9UGP4 676 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 MKLN1Q9UL63 735 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 MRPS7Q9Y2R9 242 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 PCDHB5Q9Y5E4 795 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 HACD1B0YJ81 288 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 M0R129 80 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 BTN3A3O00478 584 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ACKR2O00590 384 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ANKRD28O15084 1053 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 PLA2G10O15496 165 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 HCRTO43612 131 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ERN1O75460 977 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 HSMCR30P0CW71 290 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 CHMP24386 653 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 PRDX3P30048 256 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 HOXA9P31269 272 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ETV6P41212 452 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ETV1P50549 477 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 ATP4BP51164 291 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 RAB25P57735 213 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SNX16P57768 344 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 MBTD1Q05BQ5 628 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 IFRD2Q12894 506 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 RIN1Q13671 783 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SURF1Q15526 300 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 FAM98BQ52LJ0 330 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 ESRP1Q6NXG1 681 aaKnown RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 SLC46A3Q7Z3Q1 461 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SYVN1Q86TM6 617 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 LURAP1LQ8IV03 231 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 SLC44A2Q8IWA5 706 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 TCTE3Q8IZS6 198 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 VANGL1Q8TAA9 524 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 CD99L2Q8TCZ2 262 aa8.56□□□□□ -1.04
VAPB-201ENST00000265619 C18orf25Q96B23 403 aaPredicted RBP8.56□□□□□ -1.04
VAPB-201ENST00000265619 LINC00052Q96N35 136 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms