RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 FAM91A1Q658Y4 838 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 MBOAT1Q6ZNC8 495 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 CYS1Q717R9 158 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 JAZF1Q86VZ6 243 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 LGI4Q8N135 537 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 PLD6Q8N2A8 252 aaKnown RBP10.52□□□□□ -0.73
CD44-201ENST00000263398 SLAIN1Q8ND83 568 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 RBM18Q96H35 190 aaKnown RBP10.52□□□□□ -0.73
CD44-201ENST00000263398 TSGA13Q96PP4 275 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 TMEM9Q9P0T7 183 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 WNT9AO14904 365 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 RSL1D1O76021 490 aaKnown RBP10.52□□□□□ -0.73
CD44-201ENST00000263398 F2P00734 622 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 ALPIP09923 528 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 RYKP34925 604 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 KHKP50053 298 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 KCNQ1P51787 676 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 GSCP56915 257 aaPredicted RBP10.52□□□□□ -0.73
CD44-201ENST00000263398 C1QTNF8P60827 252 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 PPP2R2BQ00005 443 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 SEMG2Q02383 582 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 SCARB2Q14108 478 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 MYBPC3Q14896 1274 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 OR4F3Q6IEY1 312 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 MINDY2Q8NBR6 621 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 OR4C6Q8NH72 309 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 CYP2S1Q96SQ9 504 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 MED28Q9H204 178 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 OSER1Q9NX31 292 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 FZD4Q9ULV1 537 aa10.52□□□□□ -0.73
CD44-201ENST00000263398 TRBV23OR9-2A0A075B6M9 112 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 FABP12A6NFH5 140 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 REM1O75628 298 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 HSD17B2P37059 387 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ARFIP1P53367 373 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 AP3S2P59780 193 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 EMX2Q04743 252 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 FCHO2Q0JRZ9 810 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 BNIP3Q12983 259 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 SLBPQ14493 270 aaKnown RBP eCLIP10.51□□□□□ -0.73
CD44-201ENST00000263398 C1orf220Q5T0J3 134 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 BRI3BPQ8WY22 251 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 UFD1Q92890 307 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ZUFSPQ96AP4 578 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 OR2AG1Q9H205 316 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 TXNRD2Q9NNW7 524 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 PIRO00625 290 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ORC5O43913 435 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ALDOAP04075 364 aaKnown RBP10.51□□□□□ -0.73
CD44-201ENST00000263398 PRKCGP05129 697 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 CBSLP0DN79 551 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 FPR1P21462 350 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ECHS1P30084 290 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 CBSP35520 551 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ACADVLP49748 655 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ATP4BP51164 291 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 TPTEP56180 551 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 SPIN4Q56A73 249 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 RABL3Q5HYI8 236 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 CRB2Q5IJ48 1285 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 NAPRTQ6XQN6 538 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 TXNDC5Q8NBS9 432 aaKnown RBP10.51□□□□□ -0.73
CD44-201ENST00000263398 WFIKKN2Q8TEU8 576 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 BIRC7Q96CA5 298 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 TBC1D17Q9HA65 648 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 SNTG1Q9NSN8 517 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 SLC22A14Q9Y267 594 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 YIPF1Q9Y548 306 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 KCTD3Q9Y597 815 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ALS2Q96Q42 1657 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 C10orf71Q711Q0 1435 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 DUXAA6NLW8 204 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 CPSF4LA6NMK7 179 aaKnown RBP10.51□□□□□ -0.73
CD44-201ENST00000263398 FZD9O00144 591 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 LDOC1O95751 146 aaPredicted RBP10.51□□□□□ -0.73
CD44-201ENST00000263398 G6PDP11413 515 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 IGFBP4P22692 258 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 C15orf39Q6ZRI6 1047 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 OTOP2Q7RTS6 562 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 NUDT13Q86X67 352 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 CLDN19Q8N6F1 224 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 KCNJ9Q92806 393 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 C5orf34Q96MH7 638 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 COL21A1Q96P44 957 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 HTATIP2Q9BUP3 242 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 RAB11FIP5Q9BXF6 653 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 C1QTNF1Q9BXJ1 281 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 MOV10Q9HCE1 1003 aaKnown RBP10.51□□□□□ -0.73
CD44-201ENST00000263398 FBRSL1Q9HCM7 1045 aaKnown RBP10.51□□□□□ -0.73
CD44-201ENST00000263398 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 MAP10Q9P2G4 905 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 LOC730098B7Z3J9 87 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 MAGEB3O15480 346 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 IFNA6P05013 189 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 EBLN1P0CF75 366 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 GGT5P36269 586 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 PPP1R8Q12972 351 aaKnown RBP10.51□□□□□ -0.73
CD44-201ENST00000263398 MS4A13Q5J8X5 152 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 LRRC73Q5JTD7 316 aa10.51□□□□□ -0.73
CD44-201ENST00000263398 ZNF678Q5SXM1 525 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms