RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 NUS1Q96E22 293 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 LRGUKQ96M69 825 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 COQ10AQ96MF6 247 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 SLC28A3Q9HAS3 691 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 DYRK4Q9NR20 520 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 GULP1Q9UBP9 304 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 SUCOQ9UBS9 1254 aaKnown RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 BRWD1Q9NSI6 2320 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 BBIP1A8MTZ0 92 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 FOXD2O60548 495 aaPredicted RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 CYP2A7P20853 494 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 ITGB7P26010 798 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 MTPNP58546 118 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 EMX2Q04743 252 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 HYAL1Q12794 435 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 PDCD4Q53EL6 469 aaKnown RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 CCDC92Q53HC0 331 aaPredicted RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 GPR149Q86SP6 731 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 DHFR2Q86XF0 187 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 YAF2Q8IY57 180 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 SLCO4A1Q96BD0 722 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 ROPN1LQ96C74 230 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 RBM38Q9H0Z9 239 aaKnown RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 TMEM245Q9H330 911 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 LRTM1Q9HBL6 345 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 PRSS16Q9NQE7 514 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 DLGAP4Q9Y2H0 992 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 TMEM247A6NEH6 219 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 GFYI3L273 518 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 RGS14O43566 566 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 ATG13O75143 517 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 KAT7O95251 611 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 MT-ND1P03886 318 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 EBLN1P0CF75 366 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 MAP4P27816 1152 aaKnown RBP13.2□□□□□ -0.3
VMP1-201ENST00000262291 P2RY2P41231 377 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 RXRGP48443 463 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 PFN3P60673 137 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 CHIT1Q13231 466 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 ANKDD1AQ495B1 522 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 CROCCQ5TZA2 2017 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 ICA1LQ8NDH6 482 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 TMEM125Q96AQ2 219 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 CCM2Q9BSQ5 444 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 EBPLQ9BY08 206 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 SLC6A17Q9H1V8 727 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 ELOVL6Q9H5J4 265 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 TIMMDC1Q9NPL8 285 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 GID8Q9NWU2 228 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 NDUFA13Q9P0J0 144 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 AURKCQ9UQB9 309 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 FAM234BA2RU67 622 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 E7EQ34 232 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 SCAMP1O15126 338 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 TIPRLO75663 272 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 TACR1P25103 407 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 PRKG2Q13237 762 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 FAM174BQ3ZCQ3 159 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 LDLRAP1Q5SW96 308 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 ZFAND4Q86XD8 727 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 CHPFQ8IZ52 775 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 CDC26Q8NHZ8 85 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 LRIG1Q96JA1 1093 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 MTERF1Q99551 399 aaKnown RBP13.2□□□□□ -0.3
VMP1-201ENST00000262291 NTMT1Q9BV86 223 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 EPB41L1Q9H4G0 881 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 HEBP1Q9NRV9 189 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 MRGBPQ9NV56 204 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 SERGEFQ9UGK8 458 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 RIMS3Q9UJD0 308 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 DTNAQ9Y4J8 743 aa13.2□□□□□ -0.3
VMP1-201ENST00000262291 AREL1O15033 823 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 ANKRD28O15084 1053 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 MID1O15344 667 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 SLCO2B1O94956 709 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 SLC16A8O95907 504 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PCCBP05166 539 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 MPC1LP0DKB6 136 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 CD22P20273 847 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 NFKBIAP25963 317 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 GNPDA1P46926 289 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 SLC6A12P48065 614 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 LIPEQ05469 1076 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 ADGRE1Q14246 886 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 C16orf72Q14CZ0 275 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 SPANXN4Q5MJ08 99 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 NANOGP8Q6NSW7 305 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 HACD2Q6Y1H2 254 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 ADGRG6Q86SQ4 1221 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 CANT1Q8WVQ1 401 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 APIPQ96GX9 242 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 PKP4Q99569 1192 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 NANOGQ9H9S0 305 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 TM7SF3Q9NS93 570 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 DNAJC11Q9NVH1 559 aa13.19□□□□□ -0.3
VMP1-201ENST00000262291 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms