RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RSBN1Q5VWQ0 802 aaPredicted RBP12.68□□□□□ -0.38
SNX1-201ENST00000261889 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.68□□□□□ -0.38
SNX1-201ENST00000261889 BEND5Q7L4P6 421 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 TTC29Q8NA56 475 aaPredicted RBP12.68□□□□□ -0.38
SNX1-201ENST00000261889 PARVBQ9HBI1 364 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 SEPT3Q9UH03 358 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 C3orf18Q9UK00 162 aa12.68□□□□□ -0.38
SNX1-201ENST00000261889 TTC34A8MYJ7 566 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 ANKRD28O15084 1053 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 LRRTM2O43300 516 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 RHOQP17081 205 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 AKT1P31749 480 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 TRPC1P48995 793 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 ALDH7A1P49419 539 aaKnown RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 MFSD4BQ5TF39 518 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 FAM171A1Q5VUB5 890 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 ZNF691Q5VV52 312 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 HMGN2P46Q86SG4 172 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 UMODL1-AS1Q8N2C9 162 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 PAPD5Q8NDF8 572 aaKnown RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 ATL1Q8WXF7 558 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 RBM4BQ9BQ04 359 aaKnown RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 RBM4Q9BWF3 364 aaKnown RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 UGT2B28Q9BY64 529 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 BRINP2Q9C0B6 783 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 TRIT1Q9H3H1 467 aaKnown RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 PLSCR3Q9NRY6 295 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 TMEM9Q9P0T7 183 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 ERVK-11Q9UQG0 969 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 RGS5O15539 181 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 CYP11A1P05108 521 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 POU1F1P28069 291 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 CA8P35219 290 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 MRPS6P82932 125 aaKnown RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 THEM5Q8N1Q8 247 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 DEPDC4Q8N2C3 294 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 ZBTB18Q99592 522 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 TTPALQ9BTX7 342 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 CENPOQ9BU64 300 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 GPR63Q9BZJ6 419 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 AP5M1Q9H0R1 490 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 EXOSC4Q9NPD3 245 aaKnown RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 PRDM5Q9NQX1 630 aaPredicted RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 RLIMQ9NVW2 624 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 TAPBPO15533 448 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 SLC25A14O95258 325 aaPredicted RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 UMPSP11172 480 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 GJA8P48165 433 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 ZNF140P52738 457 aaPredicted RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 DOC2BQ14184 412 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 NXNL2Q5VZ03 156 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 AFMIDQ63HM1 303 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 VASH1Q7L8A9 365 aaPredicted RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 OR6Q1Q8NGQ2 317 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 RHEBL1Q8TAI7 183 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 BTBD2Q9BX70 525 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 KIAA1522Q9P206 1035 aaPredicted RBP12.67□□□□□ -0.38
SNX1-201ENST00000261889 UGT2A1Q9Y4X1 527 aa12.67□□□□□ -0.38
SNX1-201ENST00000261889 CTDSP2O14595 271 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 ULK1O75385 1050 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 NDST3O95803 873 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 FGF1P05230 155 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 BCKDHAP12694 445 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 MXD1Q05195 221 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 TRAF3Q13114 568 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 DGUOKQ16854 277 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 ZMAT1Q5H9K5 638 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 RBM48Q5RL73 367 aaKnown RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 HORMAD1Q86X24 394 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 MTERF1Q99551 399 aaKnown RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 LINC00597Q9H2U6 94 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 C2orf81A6NN90 581 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 H3BM21 787 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 APOL3O95236 402 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 HSPA14Q0VDF9 509 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 EIF4EBP2Q13542 120 aaPredicted RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 HIST2H2ACQ16777 129 aaPredicted RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 SBSNQ6UWP8 590 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 RSPO2Q6UXX9 243 aaPredicted RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 PPP1R14BQ96C90 147 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 SPATA17Q96L03 361 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 TTYH2Q9BSA4 534 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 SLIRPQ9GZT3 109 aaKnown RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 CD84Q9UIB8 345 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 RAD51BO15315 384 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 FHP07954 510 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 STSP08842 583 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 HOXD9P28356 352 aaPredicted RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 BMPR1AP36894 532 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 ST13P50502 369 aaKnown RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 MFSD14CQ5VZR4 134 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 SLC44A2Q8IWA5 706 aaPredicted RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 TCAIMQ8N3R3 496 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 VANGL1Q8TAA9 524 aaPredicted RBP12.66□□□□□ -0.38
SNX1-201ENST00000261889 APIPQ96GX9 242 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
SNX1-201ENST00000261889 ZIM2Q9NZV7 527 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms