RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 MBLAC2Q68D91 279 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 ABHD13Q7L211 337 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 NANOGNBQ7Z5D8 188 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF615Q8N8J6 731 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TSTD1Q8NFU3 115 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 ZBED6CLQ96FA7 236 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 C8orf48Q96LL4 319 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 OSBPL2Q9H1P3 480 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 SUV39H2Q9H5I1 410 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 ABI3Q9P2A4 366 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 FZD4Q9ULV1 537 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 GABRDO14764 452 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 RENP00797 406 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 FSHRP23945 695 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 PNLIPRP1P54315 467 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 MTTPP55157 894 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CCDC115Q96NT0 180 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 SYT17Q9BSW7 474 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 B3GNT4Q9C0J1 378 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 C8orf4Q9NR00 106 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TAC3Q9UHF0 121 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 PFDN2Q9UHV9 154 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 FAM234BA2RU67 622 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TULP2O00295 520 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 MID1O15344 667 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 IRAK2O43187 625 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CBFA2T3O75081 653 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 HOXB6P17509 224 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 FCHO2Q0JRZ9 810 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 DPYSL2Q16555 572 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TBC1D25Q3MII6 688 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TXNDC8Q6A555 127 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TXNRD3NBQ6F5E7 133 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 Q6ZVU0 165 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 RPS27LQ71UM5 84 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 AMIGO1Q86WK6 493 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 GJD3Q8N144 294 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 NUSAP1Q9BXS6 441 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TRIM2Q9C040 744 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TFB2MQ9H5Q4 396 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 IL1RAPQ9NPH3 570 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 PIGVQ9NUD9 493 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TMEM98Q9Y2Y6 226 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 YIPF1Q9Y548 306 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 SMAD9O15198 467 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TPD52L2O43399 206 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 ENGP17813 658 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CDKN1CP49918 316 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CRISP3P54108 245 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 PRKD1Q15139 912 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CYP27C1Q4G0S4 372 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 KIAA0930Q6ICG6 404 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 TMPRSS9Q7Z410 1059 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 Q8N9G6 341 aaPredicted RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 ANKHQ9HCJ1 492 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 KIF13AQ9H1H9 1805 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 HAS3O00219 553 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 DNM1LO00429 736 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 DNAJA2O60884 412 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 AOC2O75106 756 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 KCNQ1P51787 676 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 MAPK14Q16539 360 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 SGCBQ16585 318 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 OR4F3Q6IEY1 312 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 ADNP2Q6IQ32 1131 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 OR5K1Q8NHB7 308 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 DGAT2Q96PD7 388 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 LGR4Q9BXB1 951 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 TTYH3Q9C0H2 523 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 FZD8Q9H461 694 aa11.83□□□□□ -0.51
COL8A1-201ENST00000261037 FARSBQ9NSD9 589 aaKnown RBP11.83□□□□□ -0.51
COL8A1-201ENST00000261037 CLDN7O95471 211 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 RPLP0P05388 317 aaKnown RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 BCHEP06276 602 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 RAP2AP10114 183 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PGAM2P15259 253 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 FPGSQ05932 587 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PHF19Q5T6S3 580 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 TLCD1Q96CP7 247 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 CDC7O00311 574 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 ITGB1P05556 798 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 C8orf89P0DMQ9 161 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 FOXN2P32314 431 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 XKP51811 444 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 METTL21CQ5VZV1 264 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 FBXL22Q6P050 247 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 SLC39A3Q9BRY0 314 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 C11orf84Q9BUA3 381 aaPredicted RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 AMBNQ9NP70 447 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 SSU72Q9NP77 194 aaKnown RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 MKKSQ9NPJ1 570 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms