RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 NEK10Q6ZWH5 1172 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 FITM2Q8N6M3 262 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 FBF1Q8TES7 1133 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 N4BP2L2Q92802 583 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 PISDQ9UG56 409 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 VWA7Q9Y334 891 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 FAM159BA6NKW6 160 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 CXorf49A8MYA2 514 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 MATN2O00339 956 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 BTN3A3O00478 584 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 PRPF4O43172 522 aaKnown RBP eCLIP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 C1orf105O95561 183 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 ITGA2BP08514 1039 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 ENO3P13929 434 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 ITIH1P19827 911 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 MLLT3P42568 568 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 HECTD2Q5U5R9 776 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 FAM45BPQ6NSW5 357 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 PRSS42Q7Z5A4 293 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 TRABD2AQ86V40 505 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 ZC3HC1Q86WB0 502 aaKnown RBP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 KDF1Q8NAX2 398 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 FAM45AQ8TCE6 357 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 RAD51AP1Q96B01 352 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 CD180Q99467 661 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 PLAGL1Q9UM63 463 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 ACACBO00763 2458 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 BTN3A1O00481 513 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ATP5HO75947 161 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 FGF3P11487 239 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 CCL4P13236 92 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 CCNFP41002 786 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 CGB2Q6NT52 195 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ASRGL1Q7L266 308 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 SPNS2Q8IVW8 549 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 CPNE9Q8IYJ1 553 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ADGRF3Q8IZF5 1079 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ZNF578Q96N58 590 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ZNF768Q9H5H4 540 aaKnown RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ASCL3Q9NQ33 180 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 TXLNGQ9NUQ3 528 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 OCIAD1Q9NX40 245 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 OR6C2Q9NZP2 312 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 GSAPA4D1B5 854 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 EIF3FO00303 357 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 C1QAP02745 245 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 MPC1LP0DKB6 136 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 CCND1P24385 295 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 RAB28P51157 221 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ERVPABLB-1P60509 514 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ILF2Q12905 390 aaKnown RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 GRB7Q14451 532 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 PAQR3Q6TCH7 311 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 CYHR1Q6ZMK1 362 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 ZCCHC14Q8WYQ9 949 aaKnown RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 KLHL6Q8WZ60 621 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 RSRC1Q96IZ7 334 aaKnown RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 RAB3IPQ96QF0 476 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-201ENST00000260130 MAP3K3Q99759 626 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 MCMBPQ9BTE3 642 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 RHOJQ9H4E5 214 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 THSD1Q9NS62 852 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 SEMA5BQ9P283 1151 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 TXNDC16Q9P2K2 825 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 CIDEBQ9UHD4 219 aa16.23■□□□□ 0.19
SDCBP-201ENST00000260130 TLCD2A6NGC4 264 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 PSIP1O75475 530 aaKnown RBP16.22■□□□□ 0.19
SDCBP-201ENST00000260130 FDXRP22570 491 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 PRDX3P30048 256 aaKnown RBP16.22■□□□□ 0.19
SDCBP-201ENST00000260130 ETV5P41161 510 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 SEPHS1P49903 392 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 KPNA2P52292 529 aaKnown RBP16.22■□□□□ 0.19
SDCBP-201ENST00000260130 MAPK10P53779 464 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 PDAP1Q13442 181 aaKnown RBP16.22■□□□□ 0.19
SDCBP-201ENST00000260130 SETDB1Q15047 1291 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 TBC1D25Q3MII6 688 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 KBTBD12Q3ZCT8 623 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 RGS9BPQ6ZS82 235 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 FAM129CQ86XR2 697 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 CTAGE3PQ8IX95 158 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 SMC6Q96SB8 1091 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 CPNE1Q99829 537 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 PAIP2Q9BPZ3 127 aaKnown RBP16.22■□□□□ 0.19
SDCBP-201ENST00000260130 MENTQ9BUN1 341 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 NOP53Q9NZM5 478 aaKnown RBP16.22■□□□□ 0.19
SDCBP-201ENST00000260130 POMT2Q9UKY4 750 aa16.22■□□□□ 0.19
SDCBP-201ENST00000260130 TPRP12270 2363 aaKnown RBP16.22■□□□□ 0.19
SDCBP-201ENST00000260130 IGHV5-51A0A0C4DH38 117 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 PIPSLA2A3N6 862 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 EFCAB7A8K855 629 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 CDRT15L2A8MXV6 281 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 C2orf74A8MZ97 194 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 KRT16P08779 473 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 BDKRB1P46663 353 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 RGS4P49798 205 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 WDR4P57081 412 aaKnown RBP16.21■□□□□ 0.19
SDCBP-201ENST00000260130 RASA2Q15283 850 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 CCSMST1Q4G0I0 132 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 LRRC8EQ6NSJ5 796 aa16.21■□□□□ 0.19
SDCBP-201ENST00000260130 CARFQ8N187 725 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms