RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 VTCN1Q7Z7D3 282 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SFTPA2Q8IWL1 248 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CMTR2Q8IYT2 770 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 OR10G6Q8NH81 332 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 RLN3Q8WXF3 142 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ISL2Q96A47 359 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 HERC2P3Q9BVR0 1158 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 DGCR6LQ9BY27 220 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 RPF2Q9H7B2 306 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 MRM3Q9HC36 420 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 GID8Q9NWU2 228 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ADGRE2Q9UHX3 823 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 LOC400499M0QZD8 3231 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 MGAT4DA6NG13 374 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ARHGEF33A8MVX0 844 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 MOSPD3O75425 235 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ERAL1O75616 437 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CLDN9O95484 217 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SNAP29O95721 258 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CHRM5P08912 532 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 IDO1P14902 403 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ACPPP15309 386 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 EPORP19235 508 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 GNPDA1P46926 289 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CLCNKAP51800 687 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CYP4F3Q08477 520 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 DGCR6Q14129 220 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SLC30A9Q6PML9 568 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 HTR3DQ70Z44 454 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 KBTBD6Q86V97 674 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 HEATR4Q86WZ0 1026 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 HDDC3Q8N4P3 179 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF513Q8N8E2 541 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ENDOVQ8N8Q3 282 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 BPIFB1Q8TDL5 484 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 RHBDF1Q96CC6 855 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 DNAJA3Q96EY1 480 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 TOX2Q96NM4 488 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ACPTQ9BZG2 426 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 MMADHCQ9H3L0 296 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 EQTNQ9NQ60 294 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 WARS2Q9UGM6 360 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 DPP7Q9UHL4 492 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 LZTS1Q9Y250 596 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 NBASA2RRP1 2371 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 CACNA1HO95180 2353 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 EPOPA6NHQ4 379 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 H7BY64 318 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 RFXANKO14593 260 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 PRKD3O94806 890 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 BCKDHAP12694 445 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 C6P13671 934 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 RPS13P62277 151 aaKnown RBP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 POLR2LP62875 67 aaKnown RBP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 PPIGQ13427 754 aaKnown RBP eCLIP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 LAMB3Q13751 1172 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 PDE12Q6L8Q7 609 aaKnown RBP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 PARM1Q6UWI2 310 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 ST13P4Q8IZP2 240 aaPredicted RBP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 CACTIN-AS1Q8N1I8 211 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 SPPL2AQ8TCT8 520 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 FGF14Q92915 247 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 PRAP1Q96NZ9 151 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 TRAPPC9Q96Q05 1148 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 RANBP9Q96S59 729 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 EFHD1Q9BUP0 239 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 CD244Q9BZW8 370 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 TMEM245Q9H330 911 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 TAC3Q9UHF0 121 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 YBX2Q9Y2T7 364 aaKnown RBP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 SH3GLB1Q9Y371 365 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 TMX2-CTNND1H3BSU7 103 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 KRT6AP02538 564 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 KRT6BP04259 564 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 KRT6CP48668 564 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 TRAF3Q13114 568 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 BLMHQ13867 455 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 INPP5AQ14642 412 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 RFTN1Q14699 578 aaPredicted RBP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 LDLRAP1Q5SW96 308 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 PGM2L1Q6PCE3 622 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 TTC33Q6PID6 262 aaPredicted RBP8.85□□□□□ -0.99
CKAP2-201ENST00000258607 AGTRAPQ6RW13 159 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 VITQ6UXI7 678 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 Q6ZNB5 142 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 CHSY3Q70JA7 882 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 TMEFF1Q8IYR6 380 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 VN1R2Q8NFZ6 395 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 OR2T12Q8NG77 320 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 FAR2Q96K12 515 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 CCDC28BQ9BUN5 200 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 CHID1Q9BWS9 393 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 LRRC42Q9Y546 428 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 SVILO95425 2214 aa8.85□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF236Q9UL36 1845 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms