RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PRDM8Q9NQV8 689 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TBC1D29Q9UFV1 150 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 BTRCQ9Y297 605 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 PTGDR2Q9Y5Y4 395 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 PDZK1P1A8MUH7 402 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 PRR5-ARHGAP8B1AHC4 643 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 SCAMP1O15126 338 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 DCXO43602 365 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 PRAMEF4O60810 478 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 ATP5HO75947 161 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 RASGRP1O95267 797 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 CBX6O95503 412 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TNFP01375 233 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 NPPBP16860 134 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 CCND1P24385 295 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 AK4P27144 223 aaPredicted RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 HMOX2P30519 316 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 ADSLP30566 484 aaPredicted RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 HSD17B2P37059 387 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 SCTRP47872 440 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TBPL1P62380 186 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 PRKG2Q13237 762 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 FZD2Q14332 565 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TCHHL1Q5QJ38 904 aaPredicted RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 PRAMEF9Q5VWM5 478 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 LIPJQ5W064 366 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TMEM198Q66K66 360 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 CAPN13Q6MZZ7 669 aaPredicted RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 IQCHQ86VS3 1027 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TREML1Q86YW5 311 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 CPSF7Q8N684 471 aaKnown RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 DEFB119Q8N690 84 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 MFSD2AQ8NA29 543 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 CCL4L1Q8NHW4 92 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TUBB6Q9BUF5 446 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 MVB12BQ9H7P6 319 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 AASDHPPTQ9NRN7 309 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TXLNGQ9NUQ3 528 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 IMP3Q9NV31 184 aaKnown RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 MRGBPQ9NV56 204 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 GPRC5BQ9NZH0 403 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 POLG2Q9UHN1 485 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 LNPEPQ9UIQ6 1025 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TDRKHQ9Y2W6 561 aaKnown RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 KCNE2Q9Y6J6 123 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TNRC6BQ9UPQ9 1833 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 MDC1Q14676 2089 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 CABIN1Q9Y6J0 2220 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 KCNE1BA0A087WTH5 132 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 A6NCN8 305 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 OR52A4PA6NMU1 304 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 FFAR3O14843 346 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 SLC22A2O15244 555 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 GPR42O15529 346 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 ULK1O75385 1050 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 PRR35P0CG20 571 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 MTHFD1P11586 935 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 GNAZP19086 355 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 CD38P28907 300 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 ACTR1BP42025 376 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 HALP42357 657 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 ACTR1AP61163 376 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 RACK1P63244 317 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 IRF8Q02556 426 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 CHIT1Q13231 466 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 E2F2Q14209 437 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 FASTKQ14296 549 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 ABRAXAS2Q15018 415 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 RPE65Q16518 533 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 CPSF6Q16630 551 aaKnown RBP eCLIP9.16□□□□□ -0.94
NIP7-202ENST00000254941 CYP2A13Q16696 494 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 OGFOD2Q6N063 350 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 DUS1LQ6P1R4 473 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 IL27RAQ6UWB1 636 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 Q6ZSR9 355 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 TRIM46Q7Z4K8 759 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 PARGQ86W56 976 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 NRROSQ86YC3 692 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 MYLK4Q86YV6 388 aaPredicted RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 C1orf216Q8TAB5 229 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 GPBAR1Q8TDU6 330 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 SETD7Q8WTS6 366 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 USP7Q93009 1102 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 TUBGCP3Q96CW5 907 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 PTCD3Q96EY7 689 aaKnown RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 NSL1Q96IY1 281 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 HSPA12BQ96MM6 686 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 FERD3LQ96RJ6 166 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 MIPEPQ99797 713 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 ACTR5Q9H9F9 607 aaPredicted RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 CCDC177Q9NQR7 707 aaPredicted RBP9.16□□□□□ -0.94
NIP7-202ENST00000254941 ARL8BQ9NVJ2 186 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 SPATA7Q9P0W8 599 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 PLAGL1Q9UM63 463 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 HEBP2Q9Y5Z4 205 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 FRYLO94915 3013 aa9.16□□□□□ -0.94
NIP7-202ENST00000254941 TTC28Q96AY4 2481 aa9.15□□□□□ -0.94
NIP7-202ENST00000254941 A0A1W2PR77 199 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms