RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 CRLS1Q9UJA2 301 aa13.29□□□□□ -0.28
DDX39A-201ENST00000242776 UTP11Q9Y3A2 253 aaKnown RBP13.29□□□□□ -0.28
DDX39A-201ENST00000242776 PKDREJQ9NTG1 2253 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 AGPSO00116 658 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-201ENST00000242776 CCL22O00626 93 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 ZSCAN9O15535 394 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-201ENST00000242776 ANXA9O76027 345 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 SRP72O76094 671 aaKnown RBP13.28□□□□□ -0.28
DDX39A-201ENST00000242776 AGTP01019 485 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 UGT2B7P16662 529 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 PSMB4P28070 264 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 RPL22P35268 128 aaKnown RBP13.28□□□□□ -0.28
DDX39A-201ENST00000242776 GEMP55040 296 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 GPS1Q13098 491 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 OLIG2Q13516 323 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 TRIP13Q15645 432 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-201ENST00000242776 SLC14A2Q15849 920 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 PARP6Q2NL67 630 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 NKAIN1Q4KMZ8 207 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 BCL7AQ4VC05 210 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 AGAP7PQ5VUJ5 663 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 IRAK1BP1Q5VVH5 260 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 PRAMEF13Q5VWM6 474 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 SPESP1Q6UW49 350 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 FAM180AQ6UWF9 173 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 FAM20CQ8IXL6 584 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 NOA1Q8NC60 698 aaKnown RBP13.28□□□□□ -0.28
DDX39A-201ENST00000242776 HM13Q8TCT9 377 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 PPP4R1Q8TF05 950 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 AGAP4Q96P64 663 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 RUBCNLQ9H714 662 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 SMOXQ9NWM0 555 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 HACD3Q9P035 362 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 SH3BGRL2Q9UJC5 107 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 PLAGL1Q9UM63 463 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 AAR2Q9Y312 384 aaKnown RBP13.28□□□□□ -0.28
DDX39A-201ENST00000242776 MED13LQ71F56 2210 aa13.28□□□□□ -0.28
DDX39A-201ENST00000242776 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.27□□□□□ -0.29
DDX39A-201ENST00000242776 A0A1B0GUH1 482 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 EFCAB8A8MWE9 144 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 PSMD3O43242 534 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 JRKO75564 520 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 ZSCAN5DPP0CG00 497 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 ETS1P14921 441 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 VPS41P49754 854 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.29
DDX39A-201ENST00000242776 MPP3Q13368 585 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 BRD3Q15059 726 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 TEX35Q5T0J7 233 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 RHBDD2Q6NTF9 364 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 PCGF5Q86SE9 256 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 METTL27Q8N6F8 245 aaPredicted RBP13.27□□□□□ -0.29
DDX39A-201ENST00000242776 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.27□□□□□ -0.29
DDX39A-201ENST00000242776 LURAP1Q96LR2 239 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 TRIM51Q9BSJ1 452 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 FICDQ9BVA6 458 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 FSD1LQ9BXM9 530 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 SOX17Q9H6I2 414 aaPredicted RBP13.27□□□□□ -0.29
DDX39A-201ENST00000242776 COG4Q9H9E3 785 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 RAB6BQ9NRW1 208 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 IGSF5Q9NSI5 407 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 OLAHQ9NV23 265 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 SPHK1Q9NYA1 384 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 ICKQ9UPZ9 632 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 KLHL20Q9Y2M5 609 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 TDRKHQ9Y2W6 561 aaKnown RBP13.27□□□□□ -0.29
DDX39A-201ENST00000242776 NEU2Q9Y3R4 380 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 AP1M2Q9Y6Q5 423 aa13.27□□□□□ -0.29
DDX39A-201ENST00000242776 AKAP9Q99996 3911 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 ERI2A8K979 691 aaKnown RBP13.26□□□□□ -0.29
DDX39A-201ENST00000242776 E7EVH7 732 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 H3BMH7 237 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 MSL3P1P0C860 447 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 TSFMP43897 325 aaKnown RBP13.26□□□□□ -0.29
DDX39A-201ENST00000242776 PRLHRP49683 370 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 MRPL14Q6P1L8 145 aaKnown RBP13.26□□□□□ -0.29
DDX39A-201ENST00000242776 PRUNE1Q86TP1 453 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 NXPE1Q8N323 547 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 BBOF1Q8ND07 529 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 OR5AR1Q8NGP9 310 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 OR1N1Q8NGS0 311 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 OR13C4Q8NGS5 318 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 PROKR1Q8TCW9 393 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 DTX3LQ8TDB6 740 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 SNF8Q96H20 258 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
DDX39A-201ENST00000242776 MESP1Q9BRJ9 268 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 ERP44Q9BS26 406 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 LRRC1Q9BTT6 524 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 OR52A5Q9H2C5 316 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 TFB2MQ9H5Q4 396 aaKnown RBP13.26□□□□□ -0.29
DDX39A-201ENST00000242776 EPS8L2Q9H6S3 715 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 SLC22A11Q9NSA0 550 aa13.26□□□□□ -0.29
DDX39A-201ENST00000242776 TRGV8A0A0C4DH27 118 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 SOCS6O14544 535 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 F10P00742 488 aa13.25□□□□□ -0.29
DDX39A-201ENST00000242776 STSP08842 583 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms