RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SEMA6BQ9H3T3 888 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 TMEM184CQ9NVA4 438 aa10.9□□□□□ -0.67
MSH6-201ENST00000234420 KIAA1522Q9P206 1035 aaPredicted RBP10.9□□□□□ -0.67
MSH6-201ENST00000234420 TTC37Q6PGP7 1564 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 A0A1W2PRU2 124 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 hCG_2039718K7EN88 272 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 SDC3O75056 442 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 IL7P13232 177 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 NKX6-1P78426 367 aaPredicted RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 TMEM68Q96MH6 324 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ZSWIM3Q96MP5 696 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 OR2B2Q9GZK3 357 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ENY2Q9NPA8 101 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 GNG8Q9UK08 70 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 AP1M2Q9Y6Q5 423 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 CYP11A1P05108 521 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 SNIP1Q8TAD8 396 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 CENPNQ96H22 339 aaPredicted RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 UQCC2Q9BRT2 126 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 COMMD4Q9H0A8 199 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 GMIPQ9P107 970 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 SEC14L3Q9UDX4 400 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 MRPS33Q9Y291 106 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 FER1L4A9Z1Z3 1794 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ZNF638Q14966 1978 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 SLC16A8O95907 504 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 CATP04040 527 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 KELP23276 732 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 PSMB4P28070 264 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ERP29P30040 261 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 CMPK1P30085 196 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 NEPROQ6NW34 567 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 MCOLN2Q8IZK6 566 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ZFP28Q8NHY6 868 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 DGAT2Q96PD7 388 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 TMEM45AQ9NWC5 275 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 REV1Q9UBZ9 1251 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 EVLQ9UI08 416 aaPredicted RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 NUP153P49790 1475 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 CDRT1O95170 752 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 HK1P19367 917 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 SELENOVP59797 346 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 SNRPD2P62316 118 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 PTPN11Q06124 597 aaPredicted RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 ARFRP1Q13795 201 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 GIT2Q14161 759 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 VHLLQ6RSH7 139 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 TTLL10Q6ZVT0 673 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 TRMT2AQ8IZ69 625 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 OR2S2Q9NQN1 319 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 OR6C65A6NJZ3 312 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 WASHC1A8K0Z3 465 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 WASH3PC4AMC7 463 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 MPSTP25325 297 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 MC4RP32245 332 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 SLC3A1Q07837 685 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 WASH2PQ6VEQ5 465 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 UBQLNLQ8IYU4 475 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 METTL25Q8N6Q8 603 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 RRNAD1Q96FB5 475 aaKnown RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 ZNF223Q9UK11 482 aaPredicted RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 MDFIC2A0A1B0GVS7 189 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 NPEPPSL1A6NEC2 478 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 FPGTO14772 594 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 C1RP00736 705 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ASGR1P07306 291 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 NR2C2P49116 596 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 ERVK-25P63136 954 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 DNERQ8NFT8 737 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 CYP2W1Q8TAV3 490 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.89□□□□□ -0.67
MSH6-201ENST00000234420 PLAGL1Q9UM63 463 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 TESMINQ9Y4I5 508 aa10.89□□□□□ -0.67
MSH6-201ENST00000234420 SPIN1Q9Y657 262 aaPredicted RBP10.89□□□□□ -0.67
MSH6-201ENST00000234420 K7EPK0 472 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 AZIN1O14977 448 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 IFNA10P01566 189 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 IFNA4P05014 189 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 ERCC1P07992 297 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 GLUD2P49448 558 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 RHBDL3P58872 404 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 UBXN11Q5T124 520 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 DCST2Q5T1A1 773 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 SLC29A4Q7RTT9 530 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 FAM71E2Q8N5Q1 922 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 TREX2Q9BQ50 279 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 MRPL57Q9BQC6 102 aaKnown RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 VNN3Q9NY84 501 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 KCNS2Q9ULS6 477 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 SPHKAPQ2M3C7 1700 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 TCRBV21S2A2A0A5A6 115 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 RIIAD1A6NNX1 92 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 C9JVG2 144 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 COL6A2P12110 1019 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 OGNP20774 298 aaKnown RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 TROAPQ12815 778 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 NFATC4Q14934 902 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 VPS26BQ4G0F5 336 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms