RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 FOXM1Q08050 763 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 IL11RAQ14626 422 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 KIR2DS3Q14952 304 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 EFTUD2Q15029 972 aaKnown RBP eCLIP13.23□□□□□ -0.291e-10■■■■■ 39.4
VEGFA-201ENST00000230480 SLC5A12Q1EHB4 618 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.23□□□□□ -0.29
VEGFA-201ENST00000230480 ZNF385CQ66K41 422 aaPredicted RBP13.23□□□□□ -0.29
VEGFA-201ENST00000230480 CEACAM20Q6UY09 585 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 ZNF517Q6ZMY9 492 aaPredicted RBP13.23□□□□□ -0.29
VEGFA-201ENST00000230480 MBOAT1Q6ZNC8 495 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 STRA8Q7Z7C7 330 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 TAX1BP1Q86VP1 789 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 RUFY1Q96T51 708 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 ASPSCR1Q9BZE9 553 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 AKAP7Q9P0M2 348 aaPredicted RBP13.23□□□□□ -0.29
VEGFA-201ENST00000230480 IL17BQ9UHF5 180 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 PDE10AQ9Y233 779 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 KLK4Q9Y5K2 254 aa13.23□□□□□ -0.29
VEGFA-201ENST00000230480 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 E5RI56 91 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 K7ENP7 123 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 MATN2O00339 956 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 PFDN6O15212 129 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 CTSVO60911 334 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 VPS26AO75436 327 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 MED26O95402 600 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 SLC16A8O95907 504 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 CAPN1P07384 714 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 LIFP15018 202 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 MAGP20916 626 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 IMPA1P29218 277 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 GRIA3P42263 894 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 TUBB4BP68371 445 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 CAV1Q03135 178 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 TUBB3Q13509 450 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 TUBB2AQ13885 445 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 TERF2Q15554 542 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 KBTBD12Q3ZCT8 623 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 INO80CQ6PI98 192 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-201ENST00000230480 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 SLC26A11Q86WA9 606 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 GALNT6Q8NCL4 622 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 PPFIBP2Q8ND30 876 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 PDLIM5Q96HC4 596 aaKnown RBP13.22□□□□□ -0.29
VEGFA-201ENST00000230480 ZNF285Q96NJ3 590 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 TEFMQ96QE5 360 aaKnown RBP13.22□□□□□ -0.29
VEGFA-201ENST00000230480 TUBB2BQ9BVA1 445 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 SLC12A9Q9BXP2 914 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 SPRTNQ9H040 489 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-201ENST00000230480 RHOJQ9H4E5 214 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 CAB39LQ9H9S4 337 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 SLC6A20Q9NP91 592 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 PPANQ9NQ55 473 aaKnown RBP13.22□□□□□ -0.29
VEGFA-201ENST00000230480 ENAMQ9NRM1 1142 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 NINJ2Q9NZG7 142 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 SH2B3Q9UQQ2 575 aa13.22□□□□□ -0.29
VEGFA-201ENST00000230480 A0A0J9YY10 115 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 FAM95CA0A1B0GW59 222 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 ISM1B1AKI9 464 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 STMND1H3BQB6 276 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 EIF3FO00303 357 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-201ENST00000230480 RRP8O43159 456 aaKnown RBP13.21□□□□□ -0.29
VEGFA-201ENST00000230480 KIAA0754O94854 1291 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 NTRK1P04629 796 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 CBSLP0DN79 551 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 ENO3P13929 434 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-201ENST00000230480 RORAP35398 523 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 CBSP35520 551 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 PRKAA1Q13131 559 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 GPS2Q13227 327 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 DEFB110Q30KQ9 67 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 TMEM164Q5U3C3 297 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 ARMC6Q6NXE6 501 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 FBXO42Q6P3S6 717 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 SUSD1Q6UWL2 747 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 SBSNQ6UWP8 590 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 C19orf47Q8N9M1 422 aaKnown RBP13.21□□□□□ -0.29
VEGFA-201ENST00000230480 OR2L3Q8NG85 312 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 FBF1Q8TES7 1133 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 VPS39Q96JC1 886 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 FCRL4Q96PJ5 515 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 CCNL2Q96S94 520 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-201ENST00000230480 ZPBPQ9BS86 351 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 TXLNGYQ9BZA5 131 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 TAS2R13Q9NYV9 303 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 SPATA7Q9P0W8 599 aa13.21□□□□□ -0.29
VEGFA-201ENST00000230480 CDC7O00311 574 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 GSTA2P09210 222 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-201ENST00000230480 ITGAXP20702 1163 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 CCNFP41002 786 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 STAT5AP42229 794 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 KCNC1P48547 511 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms