RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PWWP2BQ6NUJ5 590 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 SUSD1Q6UWL2 747 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 TMEM207Q6UWW9 146 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 CDHR3Q6ZTQ4 885 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 UBE2R2Q712K3 238 aaPredicted RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 CTAGE3PQ8IX95 158 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 CACNA2D3Q8IZS8 1091 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 GALNT6Q8NCL4 622 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 FBF1Q8TES7 1133 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 ZNF501Q96CX3 271 aaPredicted RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 MCMBPQ9BTE3 642 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 RAB11FIP5Q9BXF6 653 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 SPATA7Q9P0W8 599 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 LNPEPQ9UIQ6 1025 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 ADAMTS6Q9UKP5 1117 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 CORO1CQ9ULV4 474 aaPredicted RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 MTO1Q9Y2Z2 717 aaKnown RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 TMEM184BQ9Y519 407 aaPredicted RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 LAMA5O15230 3695 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 ZBTB14O43829 449 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 PRICKLE3O43900 615 aaPredicted RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 FAM155BO75949 473 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 TSPAN12O95859 305 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 NTRK1P04629 796 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 WT1P19544 449 aaPredicted RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 MAGP20916 626 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 MAP4P27816 1152 aaKnown RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 OAS2P29728 719 aaKnown RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 ECHS1P30084 290 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 TAS2R39P59534 338 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 YBX1P67809 324 aaKnown RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 CXADRP78310 365 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 TSTA3Q13630 321 aaPredicted RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 SF1Q15637 639 aaKnown RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 CYP2A13Q16696 494 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 KBTBD12Q3ZCT8 623 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
LSM5-201ENST00000223084 MANEAQ5SRI9 462 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 ARHGAP40Q5TG30 622 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 KIAA1614Q5VZ46 1190 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 MBOAT1Q6ZNC8 495 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 CYS1Q717R9 158 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 CEP97Q8IW35 865 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 NLGN4XQ8N0W4 816 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 MYO1HQ8N1T3 1032 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 RAB42Q8N4Z0 105 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 IL22RA1Q8N6P7 574 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 PPFIBP2Q8ND30 876 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 NLGN4YQ8NFZ3 816 aaPredicted RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 OR1L3Q8NH93 324 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 CDKL2Q92772 493 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 SLC22A18Q96BI1 424 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 VPS39Q96JC1 886 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 CCNL2Q96S94 520 aaPredicted RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 MIPEPQ99797 713 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 ACAT2Q9BWD1 397 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 RHOJQ9H4E5 214 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 ABCF3Q9NUQ8 709 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.22□□□□□ -0.45
LSM5-201ENST00000223084 IKZF3Q9UKT9 509 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 PDE10AQ9Y233 779 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 HEATR5BQ9P2D3 2071 aa12.22□□□□□ -0.45
LSM5-201ENST00000223084 LOC101059948A0A1B0GTJ6 334 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 EIF3FO00303 357 aaPredicted RBP12.21□□□□□ -0.45
LSM5-201ENST00000223084 MAP3K7O43318 606 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 NRP2O60462 931 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 SLC16A8O95907 504 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 CTSBP07858 339 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 RHOXF2BP0C7M4 288 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 ERGP11308 486 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 GRIA3P42263 894 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 GABRA4P48169 554 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 PNLIPRP1P54315 467 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 IL2P60568 153 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 PHKG1Q16816 387 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 FCRL6Q6DN72 434 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 FIGLAQ6QHK4 219 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 C6orf15Q6UXA7 325 aaPredicted RBP12.21□□□□□ -0.45
LSM5-201ENST00000223084 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 TMEM126BQ8IUX1 230 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 SYTL1Q8IYJ3 562 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 DNAJC22Q8N4W6 341 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 FBXO15Q8NCQ5 510 aaPredicted RBP12.21□□□□□ -0.45
LSM5-201ENST00000223084 OR2A1Q8NGT9 310 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 HMGCLL1Q8TB92 370 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 ZNF480Q8WV37 535 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 TCTN2Q96GX1 697 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 CPNE1Q99829 537 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 RHOXF2Q9BQY4 288 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 PRORYQ9H606 182 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 CAB39LQ9H9S4 337 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 NINJ2Q9NZG7 142 aa12.21□□□□□ -0.45
LSM5-201ENST00000223084 MTRF1LQ9UGC7 380 aaKnown RBP12.21□□□□□ -0.45
LSM5-201ENST00000223084 SCRG1O75711 98 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 C8GP07360 202 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 LIFP15018 202 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms