RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 UHRF1Q96T88 793 aaPredicted RBP14.58□□□□□ -0.08
UBE2D4-201ENST00000222402 LOC100130705A0A1B0GUX0 176 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 TEX28O15482 410 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 FABP3P05413 133 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 HSMCR30P0CW71 290 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 CTSOP43234 321 aaPredicted RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ALG1LQ6GMV1 187 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 WRAP53Q9BUR4 548 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 RAPGEFL1Q9UHV5 662 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 MIA3Q5JRA6 1907 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 H3BNC9 293 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 SUV39H1O43463 412 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 FADS2O95864 444 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PABPC1P11940 636 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 HRH2P25021 359 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PPM1AP35813 382 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 HLCSP50747 726 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PON2Q15165 354 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PERM1Q5SV97 790 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ZNF697Q5TEC3 545 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ZDHHC20Q5W0Z9 365 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 C2orf73Q8N5S3 287 aaPredicted RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 DPP10Q8N608 796 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 KREMEN2Q8NCW0 462 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 CYB5D2Q8WUJ1 264 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 STARD8Q92502 1023 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 GTF2H4Q92759 462 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 TADA1Q96BN2 335 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 AP2M1Q96CW1 435 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 LMCD1Q9NZU5 365 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 VPS29Q9UBQ0 182 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PCDHB14Q9Y5E9 798 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 DICER1Q9UPY3 1922 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PDCD11Q14690 1871 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 H7C0S8 307 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ARNTLO00327 626 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 CBSLP0DN79 551 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 CBSP35520 551 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ABHD18Q0P651 414 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 CSTF3Q12996 717 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 MAPK11Q15759 364 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 CYBRD1Q53TN4 286 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ZNF648Q5T619 568 aaPredicted RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PDLIM5Q96HC4 596 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 PYURFQ96I23 114 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 RIOK2Q9BVS4 552 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 SLC2A11Q9BYW1 496 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 CWH43Q9H720 699 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ELOVL2Q9NXB9 296 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 DAPK2Q9UIK4 370 aa14.57□□□□□ -0.08
UBE2D4-201ENST00000222402 ZSWIM8A7E2V4 1837 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 SBF1O95248 1867 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 TDRD15B5MCY1 1934 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 J3QRK9 145 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 LEFTY2O00292 366 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 TOR1BO14657 336 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 PRPS1L1P21108 318 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 RPS3P23396 243 aaKnown RBP eCLIP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 PPM1FP49593 454 aaPredicted RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 GDPD4Q6W3E5 623 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 ZC3H7AQ8IWR0 971 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 ZCCHC7Q8N3Z6 543 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 SVOPQ8N4V2 548 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 FBXL8Q96CD0 374 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 DUS3LQ96G46 650 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 OCEL1Q9H607 264 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 ZNF334Q9HCZ1 680 aaPredicted RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 VPS4AQ9UN37 437 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 DOLKQ9UPQ8 538 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 XPNPEP2O43895 674 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 HNMTP50135 292 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 YBX1P67809 324 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 SRSF11Q05519 484 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 FGD3Q5JSP0 725 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 RBM48Q5RL73 367 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 PLPP4Q5VZY2 271 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 RFLNAQ6ZTI6 216 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 PTRH1Q86Y79 214 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 RAB2BQ8WUD1 216 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 ZNF583Q96ND8 569 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 HEPHQ9BQS7 1158 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 INPP5KQ9BT40 448 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 TLR9Q9NR96 1032 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 PRKAG2Q9UGJ0 569 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 DLGAP4Q9Y2H0 992 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 SCN10AQ9Y5Y9 1956 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 H3BM21 787 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 ABCB7O75027 752 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 ACRP10323 421 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 ARSIQ5FYB1 569 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 RAET1GQ6H3X3 334 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 TBPL2Q6SJ96 375 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 SPRED1Q7Z699 444 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 OR4A15Q8NGL6 344 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 EGLN2Q96KS0 407 aa14.56□□□□□ -0.08
UBE2D4-201ENST00000222402 CEP295NLQ96MC4 621 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms