RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 DUSP4Q13115 394 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PPIGQ13427 754 aaKnown RBP eCLIP15.55■□□□□ 0.081e-9■■□□□ 11.4
SF3A2-201ENST00000221494 LRIF1Q5T3J3 769 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 ATAD3BQ5T9A4 648 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 LETMD1Q6P1Q0 360 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 ADAMTSL2Q86TH1 951 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 MON1AQ86VX9 555 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 MMAAQ8IVH4 418 aaKnown RBP15.55■□□□□ 0.08
SF3A2-201ENST00000221494 CHPFQ8IZ52 775 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 MCFD2Q8NI22 146 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 SLC38A4Q969I6 547 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 TMEM169Q96HH4 297 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PITX2Q99697 317 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 CLSTN3Q9BQT9 956 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 HOXD1Q9GZZ0 328 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 NMUR1Q9HB89 426 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 TM9SF3Q9HD45 589 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 CCDC59Q9P031 241 aaKnown RBP15.55■□□□□ 0.08
SF3A2-201ENST00000221494 SAMD4AQ9UPU9 718 aaKnown RBP15.55■□□□□ 0.08
SF3A2-201ENST00000221494 INVSQ9Y283 1065 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 MAN2B2Q9Y2E5 1009 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 CCL27Q9Y4X3 112 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 POLR3HQ9Y535 204 aaPredicted RBP15.55■□□□□ 0.08
SF3A2-201ENST00000221494 LAMA2P24043 3122 aaKnown RBP15.55■□□□□ 0.08
SF3A2-201ENST00000221494 TOR1BO14657 336 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 WNT9AO14904 365 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 RAMP2O60895 175 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 SNX4O95219 450 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 MOCS2O96007 188 aaPredicted RBP15.55■□□□□ 0.08
SF3A2-201ENST00000221494 CAPN1P07384 714 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 NR4A1P22736 598 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 OR1D2P34982 312 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PPP3CCP48454 512 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 HK3P52790 923 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 VBP1P61758 197 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 ZNF235Q14590 738 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PROX2Q3B8N5 592 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 ZNF404Q494X3 552 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 MS4A13Q5J8X5 152 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 KDM4DQ6B0I6 523 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 KIAA1841Q6NSI8 718 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PNCKQ6P2M8 343 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 MSANTD1Q6ZTZ1 278 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PNPLA1Q8N8W4 532 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 GPR152Q8TDT2 470 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 NACC2Q96BF6 587 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 ZHX1-C8orf76Q96EF9 292 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 SPATA17Q96L03 361 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 FBXO44Q9H4M3 255 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 CLMPQ9H6B4 373 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 SACM1LQ9NTJ5 587 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 C1orf109Q9NX04 203 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 SPG21Q9NZD8 308 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PRKAG2Q9UGJ0 569 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 NDRG4Q9ULP0 352 aaKnown RBP15.55■□□□□ 0.08
SF3A2-201ENST00000221494 FAM50BQ9Y247 325 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 PCDHB14Q9Y5E9 798 aa15.55■□□□□ 0.08
SF3A2-201ENST00000221494 A0A096LPI6 279 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 A0A1W2PQH9 124 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 OR2A25A4D2G3 310 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 METTL15A6NJ78 407 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 GJB5O95377 273 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 ESR1P03372 595 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 S100BP04271 92 aaPredicted RBP15.54■□□□□ 0.08
SF3A2-201ENST00000221494 MASP1P48740 699 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 DGKQP52824 942 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 TBX4P57082 545 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 PTPRNQ16849 979 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 CACHD1Q5VU97 1274 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 SCIMPQ6UWF3 145 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 SNX20Q7Z614 316 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 STK40Q8N2I9 435 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 CNIH3Q8TBE1 160 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 CD200R1Q8TD46 325 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 FRS2Q8WU20 508 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 LINGO1Q96FE5 620 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 SEPT5Q99719 369 aaPredicted RBP15.54■□□□□ 0.08
SF3A2-201ENST00000221494 CPPED1Q9BRF8 314 aaPredicted RBP15.54■□□□□ 0.08
SF3A2-201ENST00000221494 ITPAQ9BY32 194 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 DPY30Q9C005 99 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 TPK1Q9H3S4 243 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
SF3A2-201ENST00000221494 AP1M2Q9Y6Q5 423 aa15.54■□□□□ 0.08
SF3A2-201ENST00000221494 PABPN1LA6NDY0 278 aaKnown RBP15.53■□□□□ 0.08
SF3A2-201ENST00000221494 AGAP5A6NIR3 686 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 C2orf81A6NN90 581 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 ZBBXA8MT70 800 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 EFCAB9A8MZ26 197 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 E9PQ18 207 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 SNPHO15079 494 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 XPNPEP2O43895 674 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 LINC00271P0C7V0 271 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 PSMB9P28065 219 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 TGFBR2P37173 567 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 GZMMP51124 257 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 HTRA4P83105 476 aaPredicted RBP15.53■□□□□ 0.08
SF3A2-201ENST00000221494 TEKQ02763 1124 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 FPGSQ05932 587 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 VAC14Q08AM6 782 aa15.53■□□□□ 0.08
SF3A2-201ENST00000221494 ABHD18Q0P651 414 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms