RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ZNF605Q86T29 641 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 ZBTB8OSQ8IWT0 167 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 OR4M2Q8NGB6 313 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 SLC22A8Q8TCC7 542 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 FAM151AQ8WW52 585 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 TPD52L3Q96J77 140 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 KIFC1Q9BW19 673 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 IFT46Q9NQC8 304 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 IGSF5Q9NSI5 407 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 RNF146Q9NTX7 359 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 GMEB2Q9UKD1 530 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 SNX10Q9Y5X0 201 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
PTPRA-201ENST00000216877 M0R082 166 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 SYN3O14994 580 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 GJB1P08034 283 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 SERPINF2P08697 491 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 EMX2Q04743 252 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 XKR3Q5GH77 459 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 SHEQ5VZ18 495 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 PKN3Q6P5Z2 889 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 TMEM81Q6P7N7 255 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 PTRH1Q86Y79 214 aaKnown RBP14.32□□□□□ -0.12
PTPRA-201ENST00000216877 ANKRD53Q8N9V6 530 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 ZNF680Q8NEM1 530 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 CEP76Q8TAP6 659 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 SDHCQ99643 169 aaPredicted RBP14.32□□□□□ -0.12
PTPRA-201ENST00000216877 SEC22CQ9BRL7 303 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 A0A1B0GTL3 188 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 CILPO75339 1184 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 PTHP01270 115 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 PIK3CGP48736 1102 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 POU4F1Q01851 419 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 PGM5Q15124 567 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 CEP68Q76N32 757 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 FAM9CQ8IZT9 166 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 NLGN4YQ8NFZ3 816 aaPredicted RBP14.32□□□□□ -0.12
PTPRA-201ENST00000216877 DNAJA4Q8WW22 397 aaPredicted RBP14.32□□□□□ -0.12
PTPRA-201ENST00000216877 USP7Q93009 1102 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 TUBB1Q9H4B7 451 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 GBA2Q9HCG7 927 aaPredicted RBP14.32□□□□□ -0.12
PTPRA-201ENST00000216877 CASS4Q9NQ75 786 aa14.32□□□□□ -0.12
PTPRA-201ENST00000216877 OR5K3A6NET4 321 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 OR51F1A6NGY5 319 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 B4GALT5O43286 388 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 UGT2B17O75795 530 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 PRDX3P30048 256 aaKnown RBP14.31□□□□□ -0.12
PTPRA-201ENST00000216877 ATP4BP51164 291 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 CLCN7P51798 805 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 FOXM1Q08050 763 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 MN1Q10571 1320 aaPredicted RBP14.31□□□□□ -0.12
PTPRA-201ENST00000216877 GTDC1Q4AE62 458 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 HECTD2Q5U5R9 776 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 LRRC17Q8N6Y2 441 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 KIAA1958Q8N8K9 716 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 WDR36Q8NI36 951 aaKnown RBP14.31□□□□□ -0.12
PTPRA-201ENST00000216877 ATG4CQ96DT6 458 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 RADILQ96JH8 1075 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 IFT22Q9H7X7 185 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 ELP3Q9H9T3 547 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 PRAMEF33A0A0G2JMD5 474 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 LOC102723532A0A0G2JNH3 316 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 PEX10O60683 326 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 PRAMEF10O60809 474 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 CD72P21854 359 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 KIR2DL3P43628 341 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 RGS1Q08116 209 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 ST3GAL4Q11206 333 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 FADDQ13158 208 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 EEF1DP3Q658K8 133 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 KIAA1841Q6NSI8 718 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 HDDC2Q7Z4H3 204 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 C1orf127Q8N9H9 656 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 TSPAN17Q96FV3 270 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 TRMOQ9BU70 441 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 SARS2Q9NP81 518 aaKnown RBP14.31□□□□□ -0.12
PTPRA-201ENST00000216877 COMMD3Q9UBI1 195 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 FAM50BQ9Y247 325 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 ASPDHA6ND91 283 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 ANKRD28O15084 1053 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 PCDHGA12O60330 932 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 SLC2A4P14672 509 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 POU2F1P14859 743 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 RPS5P46782 204 aaKnown RBP14.31□□□□□ -0.12
PTPRA-201ENST00000216877 RGS6P49758 472 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 MAPKAPK3Q16644 382 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 PIK3R6Q5UE93 754 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 ANKRD46Q86W74 232 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 KRT73Q86Y46 540 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 SGTBQ96EQ0 304 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 PDCD2LQ9BRP1 358 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 HDHD2Q9H0R4 259 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 SERHL2Q9H4I8 314 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 LIN7BQ9HAP6 207 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 VAPAQ9P0L0 249 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 EIF3KQ9UBQ5 218 aaKnown RBP14.31□□□□□ -0.12
PTPRA-201ENST00000216877 RNF112Q9ULX5 631 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 DUSP12Q9UNI6 340 aa14.31□□□□□ -0.12
PTPRA-201ENST00000216877 POLR3HQ9Y535 204 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms