RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PCDHB1Q9Y5F3 818 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF521Q96K83 1311 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 DNAJC13O75165 2243 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 AGAP5A6NIR3 686 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 JUNP05412 331 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 PIK3CBP42338 1070 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 LIMK2P53671 638 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 AQP4P55087 323 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 MFSD13AQ14CX5 517 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 TARBP2Q15633 366 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 ZDHHC20Q5W0Z9 365 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC6A7Q99884 636 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC17A7Q9P2U7 560 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 PLLPQ9Y342 182 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 SELENOVP59797 346 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 ELOAQ14241 798 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 TMEM44Q2T9K0 475 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 GPR158Q5T848 1215 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 GPR157Q5UAW9 335 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC30A8Q8IWU4 369 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 NETO2Q8NC67 525 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 RBM15BQ8NDT2 890 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 SHC3Q92529 594 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 LPGAT1Q92604 370 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 MEAF6Q9HAF1 191 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC35F4A4IF30 521 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 STK16O75716 305 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 GLP1RP43220 463 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF616Q08AN1 781 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 MERTKQ12866 999 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 TNFAIP8L2Q6P589 184 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 NDC1Q9BTX1 674 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 DUSP16Q9BY84 665 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 RANBP3Q9H6Z4 567 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 CLEC3AO75596 197 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 CYP3A4P08684 503 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 CCND3P30281 292 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 BTBD16Q32M84 506 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 AMZ1Q400G9 498 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 BBS1Q8NFJ9 593 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 LCN9Q8WX39 176 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF558Q96NG5 402 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 FBXO5Q9UKT4 447 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 NUP153P49790 1475 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ABHD2P08910 425 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 PEX2P28328 305 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC15A1P46059 708 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 PLA2G16P53816 162 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 RBM39Q14498 530 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ANKDD1AQ495B1 522 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 LRRC66Q68CR7 880 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC9B2Q86UD5 537 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 OR56B2PQ8NGI1 322 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SHKBP1Q8TBC3 707 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SULT4A1Q9BR01 284 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 YIPF4Q9BSR8 244 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 TRMOQ9BU70 441 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 TRMT61BQ9BVS5 477 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 CMAHPQ9Y471 501 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 LCHNA4D1U4 455 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 CAPN15O75808 1086 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 H6PDO95479 791 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 LEPRP48357 1165 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF670Q9BS34 389 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 LRFN1Q9P244 771 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 TNFRSF10DQ9UBN6 386 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 A0A1B0GVT2 93 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 GRM6O15303 877 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 BRINP1O60477 761 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 FAM155BO75949 473 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 APODP05090 189 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ZBTB48P10074 688 aaPredicted RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 RPS12P25398 132 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 LTKP29376 864 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 DCST2Q5T1A1 773 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 MFSD2AQ8NA29 543 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 NDUFAF4Q9P032 175 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ERVK-19Q9WJR5 959 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 HRGP04196 525 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SEC13P55735 322 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SEC23BQ15437 767 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SPATC1Q76KD6 591 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC29A4Q7RTT9 530 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 CPA6Q8N4T0 437 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 RHOJQ9H4E5 214 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 WASF2Q9Y6W5 498 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 TCAF2A6NFQ2 919 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 CXCR6O00574 342 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 F8A1P23610 371 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ERVK-21P61565 698 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ACER1Q8TDN7 264 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 NPLQ9BXD5 320 aaPredicted RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 PRDM12Q9H4Q4 367 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ABCA8O94911 1581 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 CASC3O15234 703 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 SNAPC5O75971 98 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 PER3P56645 1201 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 IFI44LQ53G44 452 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms