RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CLCN7P51798 805 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 CCINQ13939 588 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 PTCHD3Q3KNS1 767 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 PIM3Q86V86 326 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 ZNF527Q8NB42 609 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 KIAA1191Q96A73 305 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 SH3GL2Q99962 352 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 ZCCHC3Q9NUD5 404 aaKnown RBP10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 TMED5Q9Y3A6 229 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 CDC7O00311 574 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 TLX3O43711 291 aaPredicted RBP10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 POLR2CP19387 275 aaPredicted RBP10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 PAOXQ6QHF9 649 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 CLNKQ7Z7G1 428 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 BPIFB6Q8NFQ5 453 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 FGF13Q92913 245 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 CLSTN3Q9BQT9 956 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 TBL1XR1Q9BZK7 514 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 RNPEPL1Q9HAU8 725 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 HCFC1R1Q9NWW0 138 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 DDX60Q8IY21 1712 aaKnown RBP10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 COL18A1P39060 1754 aa10.11□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC22A2O15244 555 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TMCC2O75069 709 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 C6P13671 934 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 IDH3AP50213 366 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 GSCP56915 257 aaPredicted RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 DLG1Q12959 904 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 DCST1Q5T197 706 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 RBM20Q5T481 1227 aaKnown RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 NCEH1Q6PIU2 408 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 OAFQ86UD1 273 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TLCD1Q96CP7 247 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 CDK15Q96Q40 435 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TRIM39Q9HCM9 518 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 HCFC2Q9Y5Z7 792 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 KAT6AQ92794 2004 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 CAPN8A6NHC0 703 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 CENPXA8MT69 81 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 MID1O15344 667 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC16A5O15375 505 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 RABIFP47224 123 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 CREB5Q02930 508 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 RALGDSQ12967 914 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PUS10Q3MIT2 529 aaKnown RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 FAM91A1Q658Y4 838 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 C11orf88Q6PI97 169 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ABRAXAS1Q6UWZ7 409 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PTCHD4Q6ZW05 846 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 MRGPRX2Q96LB1 330 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 RANBP9Q96S59 729 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TPSD1Q9BZJ3 242 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ALG2Q9H553 416 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ZNF576Q9H609 170 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 C8orf4Q9NR00 106 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ARL8BQ9NVJ2 186 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 CXorf49A8MYA2 514 aaPredicted RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 KCNJ13O60928 360 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 SIX3O95343 332 aaPredicted RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ALPPP05187 535 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 EBLN1P0CF75 366 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ACRV1P26436 265 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 OLIG2Q13516 323 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TBC1D25Q3MII6 688 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TCEAL5Q5H9L2 206 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 BNIPLQ7Z465 357 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 HIPK1Q86Z02 1210 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 SCML4Q8N228 414 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 OR2T34Q8NGX1 318 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PIGXQ8TBF5 258 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC17A9Q9BYT1 436 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 A8MUA0 341 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 KLK1P06870 262 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 MPC1LP0DKB6 136 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PIK3CBP42338 1070 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 WNT7BP56706 349 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ELF3P78545 371 aaPredicted RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PTGES3Q15185 160 aaKnown RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 C10orf62Q5T681 223 aaPredicted RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TAS1R1Q7RTX1 841 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ZDHHC14Q8IZN3 488 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 CPXM2Q8N436 756 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TMEM156Q8N614 296 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 C1orf52Q8N6N3 182 aaKnown RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ZSCAN1Q8NBB4 408 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 LINC00597Q9H2U6 94 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 SERINC1Q9NRX5 453 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 DHRS7Q9Y394 339 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TNFRSF11BO00300 401 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ADAMDEC1O15204 470 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ADRB3P13945 408 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PLGLB1Q02325 96 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TRIM71Q2Q1W2 868 aaKnown RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 NUP54Q7Z3B4 507 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 GOLGA7Q7Z5G4 137 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PLA2G15Q8NCC3 412 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ZNF540Q8NDQ6 660 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 ARHGAP9Q9BRR9 750 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms