RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 AW551984Q8BGF0 804 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Lrrc8dQ8BGR2 859 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Trmt2bQ8BQJ6 493 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Grsf1Q8C5Q4 479 aaKnown RBP15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Wdr26Q8C6G8 641 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Gramd1aQ8VEF1 722 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Cts3Q91ZD5 332 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Haus8Q99L00 373 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Senp8Q9D2Z4 221 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Pus10Q9D3U0 527 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Atp6ap1Q9R1Q9 463 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Cib1Q9Z0F4 191 aa15.48■□□□□ 0.07
Trim39-203ENSMUST00000113706 Olfr663A0A1B0GSI9 319 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 OmdO35103 423 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Slc32a1O35633 525 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 P01675 107 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 P01676 107 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 P01677 107 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 P01678 107 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Alg6Q3TAE8 507 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Abraxas2Q3TCJ1 415 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Flot2Q60634 428 aaKnown RBP15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Actr3bQ641P0 418 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 OmpQ64288 163 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Acat2Q8CAY6 397 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Vmn1r33Q8R2E0 305 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Map3k21Q8VDG6 1002 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Hdac11Q91WA3 347 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Fam192aQ91WE2 254 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Armc1Q9D7A8 282 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 RtcAQ9D7H3 366 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Rgs3Q9DC04 966 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Sae1Q9R1T2 350 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 D3Ertd254eA0A0G2JEM5 796 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Tmem233D3Z1U7 110 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Polr2jO08740 117 aaKnown RBP15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Surf2P09926 257 aaKnown RBP15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 LmnaP48678 665 aaKnown RBP15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Il11ra2P70225 432 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Fam46cQ5SSF7 391 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Med26Q7TN02 588 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Gpr141Q7TQP0 305 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Trmt10aQ8C1Z8 328 aaKnown RBP15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Nkiras1Q8CEC5 192 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Mrpl38Q8K2M0 380 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Ms4a10Q99N03 267 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Vmn2r61L7N2B8 865 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 RaxO35602 342 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Timp2P25785 220 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Ckmt1P30275 418 aaKnown RBP15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Chrm4P32211 479 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 HalP35492 657 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Olfr1037Q7TR84 321 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 D3Ertd751eQ8BGN2 192 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Atxn7l2Q8C8K6 696 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Lmcd1Q8VEE1 365 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Rpp25Q91WE3 199 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Scd3Q99PL7 359 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Gid8Q9D7M1 228 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Kcne2Q9D808 123 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Efhd2Q9D8Y0 240 aaKnown RBP15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Mapk9Q9WTU6 423 aa15.47■□□□□ 0.07
Trim39-203ENSMUST00000113706 Igkv6-29A0A0G2JEI6 115 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Lgr4A2ARI4 951 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 AcadsQ07417 412 aaKnown RBP15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Clec12aQ504P2 267 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Olfr295Q7TS08 309 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 C2cd4bQ80XU5 340 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Thoc5Q8BKT7 683 aaKnown RBP15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Sec22cQ8BXT9 303 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Casp9Q8C3Q9 454 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Wdr47Q8CGF6 920 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 SuoxQ8R086 546 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Ntmt1Q8R2U4 223 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Olfr808Q8VGI8 312 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Olfr45Q8VGM1 311 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Ndufs2Q91WD5 463 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Dph2Q9CR25 489 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 1700086D15RikQ9D9E9 151 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Stk19Q9JHN8 254 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Gsk3bQ9WV60 420 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Gbp6A0A0G2JDV3 611 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Trgv2A2J008 116 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Ldlrad1D3YYZ1 218 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 ZfrO88532 1074 aaKnown RBP15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Hoxa9P09631 271 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Gli1P47806 1111 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Epb41P48193 858 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Nanos3P60324 178 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Lzts1P60853 599 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Scrn3Q3TMH2 418 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Kir3dl2Q673W2 388 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Sgo2Q7TSY8 1164 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Samd4aQ8CBY1 711 aaKnown RBP15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Ankrd49Q8VE42 238 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Chchd4Q8VEA4 139 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Q9CWU4 180 aaKnown RBP15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Olig2Q9EQW6 323 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Slc25a13Q9QXX4 676 aa15.46■□□□□ 0.07
Trim39-203ENSMUST00000113706 Psmd13Q9WVJ2 376 aa15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms