RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Rcc2Q8BK67 520 aaKnown RBP9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Phtf2Q8CB19 747 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fam155aQ8CCS2 467 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr812Q8VG64 310 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn1r51Q8VIC6 319 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Yae1d1Q9DAY6 216 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr704Q9EPF6 315 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Alyref2Q9JJW6 218 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Serinc3Q9QZI9 472 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ruvbl2Q9WTM5 463 aaKnown RBP9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ankrd60A2AMD2 318 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr1303A2AVW1 312 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr247E9PVJ7 320 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cyp2b23E9Q593 491 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc27a6E9Q9W4 619 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm10269G3UWD7 123 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tmem200cJ3QK46 637 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr819K7N727 320 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Psmb10O35955 273 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 CfhP06909 1234 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 InhaQ04997 366 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Esrp1Q3US41 680 aaKnown RBP9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kiaa0319Q5SZV5 1081 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Q8BZE1 841 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Q8CCC3 530 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr1499Q8VG65 314 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr570Q8VH12 312 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ugt2b38Q91WH2 530 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Glyr1Q922P9 546 aaKnown RBP9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cstf3Q99LI7 717 aaKnown RBP9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tmem208Q9CR96 173 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Smurf1Q9CUN6 731 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 4921524L21RikQ9D5T2 438 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 MthfrQ9WU20 654 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Col5a2Q3U962 1497 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tnip3A0A1D5RMN0 279 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm13088A2AGW6 460 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm13178B1AVU7 408 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ifi213D3Z5G0 586 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ccdc149F6V035 524 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm3327F7C9A1 213 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vti1bO88384 232 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Klk1b16P04071 261 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mthfd2P18155 350 aaKnown RBP9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tap1P21958 724 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fdx1P46656 188 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 SykP48025 629 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cyp2c38P56655 490 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 MitfQ08874 526 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Prss55Q14BX2 321 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 FuzQ3UYI6 415 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Snta1Q61234 503 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Casc4Q6P2L7 435 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kyat3Q71RI9 455 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kcmf1Q80UY2 381 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fam92aQ8BP22 355 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fam160b1Q8CDM8 764 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rbmx2Q8R0F5 326 aaKnown RBP9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Il36gQ8R460 164 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Man2c1Q91W89 1039 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nphs2Q91X05 385 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gmcl1Q920G9 524 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Galnt11Q921L8 608 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ppp6cQ9CQR6 305 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Atp6ap2Q9CYN9 350 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Spaca7Q9D2S4 182 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ubqln5Q9D4I8 510 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 2200002D01RikQ9D809 114 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Aldh6a1Q9EQ20 535 aaKnown RBP9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mkrn2Q9ERV1 416 aaKnown RBP9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 C1galt1Q9JJ06 363 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 PtsQ9R1Z7 144 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Map3k6Q9WTR2 1291 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rhox2dW4VSN9 191 aa9.52□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tspoap1Q7TNF8 1846 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp534A2A7A1 661 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Catsperg2C6KI89 1145 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp988F6VKC7 633 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm21411J3KMS0 136 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ntf3P20181 258 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gli1P47806 1111 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rpl36P47964 105 aaKnown RBP9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cav3P51637 151 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fkbp14P59024 211 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Snap25P60879 206 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Csnk2bP67871 215 aaKnown RBP9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Etv6P97360 485 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fbln1Q08879 705 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp987Q32P14 633 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm773Q3TML4 206 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nudt18Q3U2V3 323 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Usp22Q5DU02 525 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Has1Q61647 583 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fam120bQ6RI63 786 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rslcan18Q7M6X5 460 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Raver2Q7TPD6 673 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Q8BHB7 409 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Comtd1Q8BIG7 262 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ppp1r1cQ8BKK4 108 aa9.52□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mab21l2Q8BPP1 359 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms