RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Camk1Q91YS8 374 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Atg12Q9CQY1 141 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 5330417H12RikQ9D3P2 110 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem41aQ9D8U2 264 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr49Q9Z1V0 313 aa11.73□□□□□ -0.53
Trim56-201ENSMUST00000054384 JtbO88824 146 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Q3UST5 385 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Akt2Q60823 481 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hsd3b5Q61694 373 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sema4bQ62179 823 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 GatcQ8CBY0 155 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mtfr1lQ9CWE0 289 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Akr1a1Q9JII6 325 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 GraspQ9JJA9 392 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prl2c5Q9JLV9 222 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Abca14E9Q8F8 1683 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Aldoart1A6ZI46 419 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dpysl4O35098 572 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Irf6P97431 467 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cmklr1P97468 371 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Armc5Q5EBP3 926 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Grid2Q61625 1007 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 MogsQ80UM7 834 aaKnown RBP11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gtf2a2Q80ZM7 109 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cstf2Q8BIQ5 580 aaKnown RBP11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 SdslQ8R238 329 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 NoboxQ8VIH1 527 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mrpl15Q9CPR5 295 aaKnown RBP11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dnase1l2Q9D1G0 278 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 DlstQ9D2G2 454 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Setbp1Q9Z180 1582 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 TomtA1Y9I9 258 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 4930558K02RikE0CXC6 182 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sypl2O89104 264 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cdh1P09803 884 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sept4P28661 478 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr664Q7TRP5 306 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fem1cQ8CEF1 617 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem203Q8R235 136 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pcdhb4Q91XZ6 784 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 4930550L24RikQ99PA7 320 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Spag17Q5S003 2320 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Abcg1Q64343 666 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Psmf1Q8BHL8 271 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Colec10Q8CF98 277 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cst14Q8VII3 130 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mri1Q9CQT1 369 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Oxct2bQ9ESL0 520 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Oxct2aQ9JJN4 520 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr618K7N6B3 318 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rem1O35929 297 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 LipcP27656 510 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Kcnj12P52187 427 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Polr3bP59470 1133 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 BcheQ03311 603 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Taf1cQ6PDZ2 836 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pramel7Q810Y8 479 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nhlrc2Q8BZW8 725 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 TiparpQ8C1B2 657 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Unc5aQ8K1S4 898 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sgpl1Q8R0X7 568 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sntg1Q925E1 517 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 TescQ9JKL5 214 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn2r93L7N1Z9 857 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Psmc3ipO35047 217 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ldb1P70662 411 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fmo3P97501 534 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 AxlQ00993 888 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zfp791Q497V9 528 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rtp1Q8C8C1 263 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Atp6v1g1Q9CR51 118 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lrrc57Q9D1G5 239 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 TroapB7ZNG4 668 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hnrnph3D3Z3N4 346 aaKnown RBP11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Aif1O70200 147 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gdi2Q61598 445 aaKnown RBP11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc6a7Q6PGE7 637 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Bnip1Q6QD59 228 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lrrc39Q8BGI7 337 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ces2eQ8BK48 559 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc38a4Q8R1S9 547 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lysmd3Q99LE3 305 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hspa14Q99M31 509 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ints12Q9D168 461 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fam173bQ9D1Z3 247 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zdhhc21Q9D270 265 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 PlgrktQ9D3P8 147 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 NtsQ9D3P9 169 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tbc1d21Q9D9D3 336 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Eny2Q9JIX0 101 aaKnown RBP11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cdh22Q9WTP5 813 aa11.72□□□□□ -0.53
Trim56-201ENSMUST00000054384 GnazO70443 355 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Bmp4P21275 408 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 LdlrP35951 862 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rph3aP47708 681 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 MtpnP62774 118 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Atp5a1Q03265 553 aaKnown RBP11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sppl2bQ3TD49 578 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 1810065E05RikQ5NC41 235 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 CcncQ62447 283 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 83.4 ms