RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 PyglQ9ET01 850 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr839-ps1A0A1D5RMH6 312 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rnf39A2RT81 352 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sec14l5B2RXM5 696 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Nlrp12E9Q5R7 1054 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm1110F6Y113 635 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Kcnk1O08581 336 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Hoxd12P23812 268 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pcbp2Q61990 362 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Nr6a1Q64249 495 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sgo2Q7TSY8 1164 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 4930503B20RikQ80ZP0 234 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Anapc2Q8BZQ7 837 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sept11Q8C1B7 431 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Galnt13Q8CF93 556 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Actr8Q8R2S9 624 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 4930550L24RikQ99PA7 320 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm26657Q9CVR1 127 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Efhd2Q9D8Y0 240 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rgs3Q9DC04 966 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tor1bQ9ER41 336 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc13a1Q9JHI4 594 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfc3h1B2RT41 1992 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Atg2bQ80XK6 2075 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 CenpfE9Q3P4 2997 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tcrg-V3A0A0G2JEW2 117 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rpl7a-ps3A0A140T8L1 270 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm21885A0A286YDN8 145 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fbxo47A2A6H3 451 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Phf11A6H5X4 337 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Alkal1J3QPP8 127 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1513L7N457 313 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc32a1O35633 525 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfp14P10755 501 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Q14AM7 275 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Msto1Q2YDW2 556 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Uap1l1Q3TW96 507 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pnliprp1Q5BKQ4 473 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fut10Q5F2L2 481 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Serpinb1cQ5SV42 375 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tmem151bQ68FE7 561 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tmtc4Q8BG19 741 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Trmt12Q8BG71 446 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Arhgap24Q8C4V1 747 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pi4k2bQ8CBQ5 469 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc47a1Q8K0H1 567 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Creb5Q8K1L0 357 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 ClyblQ8R4N0 338 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pdia5Q921X9 517 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Trim33Q99PP7 1142 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 AasdhpptQ9CQF6 309 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mrpl45Q9D0Q7 306 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tmprss6Q9DBI0 811 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 P33monoxQ9DBN4 303 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc28a3Q9ERH8 703 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gtf2h2Q9JIB4 396 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Upk3aQ9JKX8 287 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cdkl2Q9QUK0 568 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rai2Q9QVY8 529 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vnn3Q9QZ25 500 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Anapc1P53995 1944 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn1r3A2AMT7 306 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Spata31d1cE9QAF1 853 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm10250G3X9L6 160 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Obox5G3X9P6 291 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Galnt1O08912 559 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Surf2P09926 257 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ifngr1P15261 477 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 ClgnP52194 611 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Aqp4P55088 323 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Stx1bP61264 288 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cyth2P63034 400 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Q32M26 199 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Kcnh6Q32ME0 950 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Stox2Q499E5 926 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 4930438A08RikQ5SPH3 536 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Dnajc11Q5U458 559 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cpa6Q5U901 438 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Q6P1I3 445 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cpa1Q7TPZ8 419 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1322Q7TQW3 310 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zc3hav1lQ8BFR1 296 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rbm45Q8BHN5 476 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Lin7aQ8JZS0 233 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rbmx2Q8R0F5 326 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn1r79Q8R285 306 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfyve21Q8VCM3 234 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr853Q8VGG6 305 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr353Q8VGK0 311 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 DgkgQ91WG7 788 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sult5a1Q91X36 291 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Dio3Q91ZI8 304 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tmco1Q921L3 188 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Krcc1Q99JT5 256 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 MispQ9D279 648 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ndufs3Q9DCT2 263 aaKnown RBP8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 Atp5hQ9DCX2 161 aa8.47□□□□□ -1.05
Trim39-201ENSMUST00000042717 F8Q06194 2319 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm28168A0A087WNP1 180 aa8.46□□□□□ -1.05
Trim39-201ENSMUST00000042717 Smok3cA0A087WSF2 504 aa8.46□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms