RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm5072A2AHM1 344 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pramef25A2ASI9 494 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Skint11A7XV14 364 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Calhm3J3QMI4 347 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 AlyrefO08583 255 aaKnown RBP12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cbx4O55187 551 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 AmbnO55189 407 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Dhcr7O88455 471 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 ClppO88696 272 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 DcnP28654 354 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kcnj13P86046 360 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ccser2Q3UHI0 833 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 MarcoQ60754 518 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pex11gQ6P6M5 241 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ppp1r1cQ8BKK4 108 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Smad3Q8BUN5 425 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pomgnt2Q8BW41 605 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fmo9Q8C116 539 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Trnt1Q8K1J6 434 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 AmotQ8VHG2 1126 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Lactb2Q99KR3 288 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tex47Q9D5W8 253 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Smg9Q9DB90 520 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 ClpxQ9JHS4 634 aaKnown RBP12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm16494E9Q2Z4 87 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm3488M0QW81 238 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 St14P56677 855 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 ArvcfP98203 962 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gpr165Q3V3A3 455 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Zc3h12aQ5D1E7 596 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 SynaQ5G5D5 617 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pdcd4Q61823 469 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr366Q7TRY4 309 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Q80Y39 304 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 4933402J07RikQ8BHX0 270 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pcyox1lQ8C7K6 495 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Q8CDN1 933 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr807Q8VGI9 311 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Uts2rQ8VIH9 385 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rnf111Q99ML9 989 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cnot11Q9CWN7 505 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 NtsQ9D3P9 169 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 P33monoxQ9DBN4 303 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fkbp9Q9Z247 570 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Htatip2Q9Z2G9 242 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 PatjQ63ZW7 1834 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr675A0A1B0GSE1 317 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cyp27b1O35084 507 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kpna6O35345 536 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tulp3O88413 460 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cfap97Q6ZPR1 541 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Arhgef38Q80VK6 770 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gpr171Q8BG55 319 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rnf181Q9CY62 165 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Spcs2Q9CYN2 226 aaKnown RBP12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 PyurfQ9D1C3 112 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Q9DAY5 185 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tas2r119Q9JKT2 335 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tpk1Q9R0M5 243 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mbtps1Q9WTZ2 1052 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mllt10O54826 1068 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 P01641 117 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 LckP06240 509 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Lamp1P11438 406 aaKnown RBP12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ptger3P30557 365 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gpx3P46412 226 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 CcnfP51944 777 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Col6a2Q02788 1034 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fpr-rs6Q3SXG2 339 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cdh12Q5RJH3 794 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fstl1Q62356 306 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Trim50Q810I2 483 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 LsampQ8BLK3 341 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr722Q8VFC8 308 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gorasp1Q91X51 446 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Dlg2Q91XM9 852 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Socs4Q91ZA6 436 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 HnrnpllQ921F4 591 aaKnown RBP12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 BollQ924M5 281 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 ArskQ9D2L1 553 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Slc5a3Q9JKZ2 718 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Dyrk1bQ9Z188 629 aa12.48□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tmem236A2ARJ3 344 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mterf1bB9EJ57 379 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm2956E9PVJ0 216 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm5796E9Q7M8 205 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm3629K7N6Y2 205 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm10340K7N708 205 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm8108K7N734 216 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Atn1O35126 1175 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Aif1O70200 147 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 St3gal5O88829 414 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mkln1O89050 735 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ccnb2P30276 398 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 GaaP70699 953 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rbm15Q0VBL3 962 aaKnown RBP12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gpr15Q0VDU3 360 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ccdc177Q3UHB8 706 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Slc22a15Q504N2 544 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rnf43Q5NCP0 784 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms