RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZYG11AQ6WRX3 759 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 PIP4P1Q86T03 277 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 NAXDQ8IW45 347 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 LRRC56Q8IYG6 542 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-213ENST00000642137 FBXO39Q8N4B4 442 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 CCDC63Q8NA47 563 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 ARMC2Q8NEN0 867 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 BAHD1Q8TBE0 780 aaPredicted RBP11.94□□□□□ -0.5
LINC00339-213ENST00000642137 ZNF480Q8WV37 535 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 CCDC126Q96EE4 140 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 CDC6Q99741 560 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 TWSG1Q9GZX9 223 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 SRMSQ9H3Y6 488 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 EPB41L1Q9H4G0 881 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 NKIRAS1Q9NYS0 192 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 COPG2Q9UBF2 871 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 ICKQ9UPZ9 632 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 TNPO3Q9Y5L0 923 aaKnown RBP11.94□□□□□ -0.5
LINC00339-213ENST00000642137 WDFY4Q6ZS81 3184 aa11.94□□□□□ -0.5
LINC00339-213ENST00000642137 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 CPED1A4D0V7 1026 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 NCF1BA6NI72 391 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 NCF1CA8MVU1 366 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 E7ENX8 843 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 B4GAT1O43505 415 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 GFRA3O60609 400 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 IPO13O94829 963 aaKnown RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 DHRS4L1P0CG22 281 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 MYF5P13349 255 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 GFAPP14136 432 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 NCF1P14598 390 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 AMD1P17707 334 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 ACP1P24666 158 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 HPDP32754 393 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 DNAJB13P59910 316 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 GPLD1P80108 840 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 NFKB2Q00653 900 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 TAP2Q03519 686 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 SQSTM1Q13501 440 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 SETDB1Q15047 1291 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 PLCL1Q15111 1095 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 PCBP2Q15366 365 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 PFKFB4Q16877 469 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 ZXDCQ2QGD7 858 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 KLHL35Q6PF15 583 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 MBOAT1Q6ZNC8 495 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 KLHDC8AQ8IYD2 350 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 SYTL1Q8IYJ3 562 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 ADGRF3Q8IZF5 1079 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 OR56A3Q8NH54 315 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 SMPDL3AQ92484 453 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 EXT2Q93063 718 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 IL17FQ96PD4 163 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 TBC1D10AQ9BXI6 508 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 CD244Q9BZW8 370 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 RAB33BQ9H082 229 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 ATG10Q9H0Y0 220 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 XKR8Q9H6D3 395 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
LINC00339-213ENST00000642137 OXSMQ9NWU1 459 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 FTSJ1Q9UET6 329 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 CIDEBQ9UHD4 219 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 PLAGL1Q9UM63 463 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 ENTPD2Q9Y5L3 495 aa11.93□□□□□ -0.5
LINC00339-213ENST00000642137 IGHV1OR21-1A0A087WYE8 117 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 KRT87PA6NCN2 255 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 OR5K3A6NET4 321 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 A8MT66 165 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 BTN3A3O00478 584 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 BIRC5O15392 142 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 TNFSF14O43557 240 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PRICKLE3O43900 615 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 TRIM13O60858 407 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 STK16O75716 305 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 UBXN7O94888 489 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PROS1P07225 676 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 GP1BAP07359 652 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 BPGMP07738 259 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 IMPDH1P20839 514 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 CCND1P24385 295 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 ALDH4A1P30038 563 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 SLC6A12P48065 614 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PRKAA2P54646 552 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 OR1D5P58170 312 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 NAA20P61599 178 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 ASPHQ12797 758 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 NAE1Q13564 534 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 FASTKQ14296 549 aaKnown RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 KIR2DS3Q14952 304 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PTCHD3Q3KNS1 767 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 PERM1Q5SV97 790 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 CAPN13Q6MZZ7 669 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 GUSBP11Q6P575 273 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 EFL1Q7Z2Z2 1120 aaKnown RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 RAB44Q7Z6P3 723 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 OOSP2Q86WS3 158 aa11.92□□□□□ -0.5
LINC00339-213ENST00000642137 ZNF761Q86XN6 746 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-213ENST00000642137 ARFGAP2Q8N6H7 521 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms